RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 SPARTQ8N0X7 666 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 LINC00597Q9H2U6 94 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 SSUH2Q9Y2M2 353 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 ACTL7AQ9Y615 435 aa8.61□□□□□ -1.03
NIPBL-202ENST00000448238 SOX1O00570 391 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-202ENST00000448238 MMP7P09237 267 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-202ENST00000448238 TRAPPC2P0DI81 140 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 TRAPPC2BP0DI82 140 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 CXCL8P10145 99 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 IKBKEQ14164 716 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 DCLRE1AQ6PJP8 1040 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 RFPL4BQ6ZWI9 263 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 C4orf19Q8IY42 314 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 SLAMF9Q96A28 289 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 APH1AQ96BI3 265 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 REEP6Q96HR9 211 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 PYURFQ96I23 114 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 PPP5D1E7EU14 171 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 MSTNO14793 375 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 NDST3O95803 873 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 ANKRD22Q5VYY1 191 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 GNPDA2Q8TDQ7 276 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 ZDHHC1Q8WTX9 485 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 ART4Q93070 314 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 ADAP2Q9NPF8 381 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 FAM118AQ9NWS6 357 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 NUBP2Q9Y5Y2 271 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 MEIS2O14770 477 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 ZIC2O95409 532 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-202ENST00000448238 CSF1P09603 554 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 CT45A10P0DMU9 189 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 RAB3AP20336 220 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 TUSC3Q13454 348 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 ARL13AQ5H913 290 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-202ENST00000448238 SLC27A4Q6P1M0 643 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 LFNGQ8NES3 379 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 MFFQ9GZY8 342 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 GGT3PA6NGU5 568 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 MT-ND1P03886 318 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 NBPF12Q5TAG4 269 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-202ENST00000448238 COL13A1Q5TAT6 717 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-202ENST00000448238 BCL2L15Q5TBC7 163 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 KIAA1211LQ6NV74 962 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 CCBE1Q6UXH8 406 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-202ENST00000448238 DCUN1D3Q8IWE4 304 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 OR4N5Q8IXE1 308 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 PAQR8Q8TEZ7 354 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 BCL7BQ9BQE9 202 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 CCM2LQ9NUG4 571 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-202ENST00000448238 ADGBQ8N7X0 1667 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 GSG1L2A8MUP6 293 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 C7P10643 843 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 CELP19835 753 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 TBPP20226 339 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 RAB5AP20339 215 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 G0S2P27469 103 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 PRSS3P35030 304 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 ACSM3Q53FZ2 586 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 LBHQ53QV2 105 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-202ENST00000448238 TMEM200AQ86VY9 491 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 NDNFQ8TB73 568 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 ZFAND1Q8TCF1 268 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 PKP4Q99569 1192 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 LSM5Q9Y4Y9 91 aaKnown RBP8.6□□□□□ -1.03
NIPBL-202ENST00000448238 CEPT1Q9Y6K0 416 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 OTOFQ9HC10 1997 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 A2MP01023 1474 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 ALOX15BO15296 676 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 PCDH7O60245 1069 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 CLCNKAP51800 687 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 ERVK-21P61565 698 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 FOXR2Q6PJQ5 311 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 ANKRD23Q86SG2 305 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 VWA5B2Q8N398 1253 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 CHDHQ8NE62 594 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-202ENST00000448238 OR2M7Q8NG81 312 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 TRUB1Q8WWH5 349 aaKnown RBP8.6□□□□□ -1.03
NIPBL-202ENST00000448238 ZNF641Q96N77 438 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-202ENST00000448238 OR7D2Q96RA2 312 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 ARHGAP9Q9BRR9 750 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 LACRTQ9GZZ8 138 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 C2orf42Q9NWW7 574 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 OSER1Q9NX31 292 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 ZIM2Q9NZV7 527 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 RNF181Q9P0P0 153 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 ZNF518AQ6AHZ1 1483 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 hCG_1809904A0A1W2PP81 198 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 A0A1W2PPE2 198 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 A0A1W2PR64 198 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 A0A1W2PRV1 198 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 A8MV72 311 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-202ENST00000448238 PTGER3P43115 390 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 GPR143P51810 404 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 IL13RA1P78552 427 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 SP2Q02086 613 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 POM121L1PQ3SYA9 428 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 CARD17Q5XLA6 110 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 FAM205BPQ63HN1 556 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 CEACAM19Q7Z692 300 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 OR10T2Q8NGX3 314 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms