RNA–Protein interactions for RNA: ENST00000448217.2

SCAP-208, Transcript of SREBF chaperone, human

TSL 4

Gene SCAP, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAP-208	ENST00000448217	AGRP	O00253	132 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	PLOD3	O60568	738 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	B4GALT2	O60909	372 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	LDB3	O75112	727 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	CNOT3	O75175	753 aa	Known RBP	11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	TNFSF15	O95150	251 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	ABCB1	P08183	1280 aa	Predicted RBP	11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	UQCRC2	P22695	453 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	PPIB	P23284	216 aa	Known RBP	11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	FEN1	P39748	380 aa	Known RBP	11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	CDKN2C	P42773	168 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	STT3A	P46977	705 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	NCBP2	P52298	156 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	PSME3	P61289	254 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	SLC25A3	Q00325	362 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	SLC13A2	Q13183	592 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	CAMK2B	Q13554	666 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	RTP5	Q14D33	572 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	VWA2	Q5GFL6	755 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	C6orf10	Q5SRN2	563 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	LCN10	Q6JVE6	187 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	NANOGP8	Q6NSW7	305 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	ZNF551	Q7Z340	670 aa	Predicted RBP	11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	TIPARP	Q7Z3E1	657 aa	Known RBP	11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	GPR155	Q7Z3F1	870 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	ANKRD46	Q86W74	232 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	ESX1	Q8N693	406 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	GALNT6	Q8NCL4	622 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	OR4A15	Q8NGL6	344 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	SFXN5	Q8TD22	340 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	MOAP1	Q96BY2	351 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	CTHRC1	Q96CG8	243 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	SH3GL1	Q99961	368 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	VN1R1	Q9GZP7	353 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	CHST8	Q9H2A9	424 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	EPS8L2	Q9H6S3	715 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	NANOG	Q9H9S0	305 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	SEMA3G	Q9NS98	782 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	SLC6A13	Q9NSD5	602 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	VAPA	Q9P0L0	249 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	PADI1	Q9ULC6	663 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	PRPF19	Q9UMS4	504 aa	Known RBP	11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	VPS4A	Q9UN37	437 aa		11.17	□□□□□ -0.62
SCAP-208	ENST00000448217	SPEG	Q15772	3267 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217		A0A1W2PS29	197 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217		C9J4A7	227 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	GYG2	O15488	501 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	GSC2	O15499	205 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	JRK	O75564	520 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	CPSF4	O95639	269 aa	Known RBP	11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	CCNYL3	P0C7X3	344 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	C8orf89	P0DMQ9	161 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	SOX18	P35713	384 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	EFNA3	P52797	238 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	GABRE	P78334	506 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	BTG2	P78543	158 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	TXNL4A	P83876	142 aa	Known RBP	11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	MXRA7	P84157	204 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	PLIN5	Q00G26	463 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	VAC14	Q08AM6	782 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	MGAT2	Q10469	447 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	STX4	Q12846	297 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	MAP4K2	Q12851	820 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	ERV3-1	Q14264	604 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	NCF4	Q15080	339 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	PRICKLE4	Q2TBC4	344 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	ZNF750	Q32MQ0	723 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	ZNF628	Q5EBL2	1059 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	OR4N5	Q8IXE1	308 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	SLC15A3	Q8IY34	581 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	CCDC116	Q8IYX3	515 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	ZFP90	Q8TF47	636 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	MR1	Q95460	341 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	ELP4	Q96EB1	424 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	ZNF578	Q96N58	590 aa	Predicted RBP	11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	PTCHD1	Q96NR3	888 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	CPPED1	Q9BRF8	314 aa	Predicted RBP	11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	ALOXE3	Q9BYJ1	711 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	CXorf36	Q9H7Y0	433 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	SPAG4	Q9NPE6	437 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	ASCL3	Q9NQ33	180 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	NECTIN3	Q9NQS3	549 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	FOXJ2	Q9P0K8	574 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	PTGFRN	Q9P2B2	879 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	TMEM181	Q9P2C4	612 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217	ZNF639	Q9UID6	485 aa		11.16	□□□□□ -0.62
SCAP-208	ENST00000448217		A0A1W2PQ72	361 aa		11.15	□□□□□ -0.62
SCAP-208	ENST00000448217	DCDC2B	A2VCK2	349 aa		11.15	□□□□□ -0.62
SCAP-208	ENST00000448217	FAM149A	A5PLN7	773 aa		11.15	□□□□□ -0.62
SCAP-208	ENST00000448217	ERICH4	A6NGS2	130 aa		11.15	□□□□□ -0.62
SCAP-208	ENST00000448217	IDS	B3KWA1	339 aa		11.15	□□□□□ -0.62
SCAP-208	ENST00000448217	TERT	O14746	1132 aa	Known RBP	11.15	□□□□□ -0.62
SCAP-208	ENST00000448217	DNAJA2	O60884	412 aa		11.15	□□□□□ -0.62
SCAP-208	ENST00000448217	KLF7	O75840	302 aa	Predicted RBP	11.15	□□□□□ -0.62
SCAP-208	ENST00000448217	DNAJC8	O75937	253 aa	Predicted RBP	11.15	□□□□□ -0.62
SCAP-208	ENST00000448217	PSMG1	O95456	288 aa		11.15	□□□□□ -0.62
SCAP-208	ENST00000448217	ANP32D	O95626	131 aa		11.15	□□□□□ -0.62
SCAP-208	ENST00000448217	GPX2	P18283	190 aa		11.15	□□□□□ -0.62
SCAP-208	ENST00000448217	EFNA1	P20827	205 aa	Predicted RBP	11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms