RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 SMAD4Q13485 552 aaKnown RBP3.85□□□□□ -1.79
PTPN12-208ENST00000447995 GPM6BQ13491 265 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 SCARB2Q14108 478 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 GNA13Q14344 377 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 NFE2L1Q14494 772 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 ZNF234Q14588 700 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 SLC9A5Q14940 896 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 HEPACAMQ14CZ8 416 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 MAD2L1BPQ15013 274 aaPredicted RBP3.85□□□□□ -1.79
PTPN12-208ENST00000447995 MOGQ16653 247 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 MEP1AQ16819 746 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 CTU2Q2VPK5 515 aaKnown RBP3.85□□□□□ -1.79
PTPN12-208ENST00000447995 ZNF829Q3KNS6 432 aaPredicted RBP3.85□□□□□ -1.79
PTPN12-208ENST00000447995 CCSMST1Q4G0I0 132 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 TCEAL5Q5H9L2 206 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 CRB2Q5IJ48 1285 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 FAM78AQ5JUQ0 283 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.85□□□□□ -1.79
PTPN12-208ENST00000447995 DEPDC1Q5TB30 811 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 GTF2IRD2BQ6EKJ0 949 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 XAF1Q6GPH4 301 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 REEP3Q6NUK4 255 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 PNCKQ6P2M8 343 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 ZNF551Q7Z340 670 aaPredicted RBP3.85□□□□□ -1.79
PTPN12-208ENST00000447995 VTCN1Q7Z7D3 282 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 GALNT5Q7Z7M9 940 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 TMEM179BQ7Z7N9 219 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 RBM23Q86U06 439 aaKnown RBP3.85□□□□□ -1.79
PTPN12-208ENST00000447995 SLC9B2Q86UD5 537 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 GTF2IRD2Q86UP8 949 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 TRIM74Q86UV6 250 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 CYP4Z1Q86W10 505 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 ANKRD13BQ86YJ7 626 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 ARMC8Q8IUR7 673 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 MMAAQ8IVH4 418 aaKnown RBP3.85□□□□□ -1.79
PTPN12-208ENST00000447995 P3H2Q8IVL5 708 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 CHPFQ8IZ52 775 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 HS3ST5Q8IZT8 346 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 LILRA3Q8N6C8 439 aaPredicted RBP3.85□□□□□ -1.79
PTPN12-208ENST00000447995 ZNF366Q8N895 744 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 C19orf47Q8N9M1 422 aaKnown RBP3.85□□□□□ -1.79
PTPN12-208ENST00000447995 ZNF540Q8NDQ6 660 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 BPIFB6Q8NFQ5 453 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 OR5K2Q8NHB8 316 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.85□□□□□ -1.79
PTPN12-208ENST00000447995 FAM81AQ8TBF8 368 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 SPPL2AQ8TCT8 520 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 RASSF5Q8WWW0 418 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 S100ZQ8WXG8 99 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 OR5P2Q8WZ92 322 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 TFGQ92734 400 aaPredicted RBP3.85□□□□□ -1.79
PTPN12-208ENST00000447995 RORBQ92753 470 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 MYDGFQ969H8 173 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 ZBED6CLQ96FA7 236 aaPredicted RBP3.85□□□□□ -1.79
PTPN12-208ENST00000447995 LOXL4Q96JB6 756 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 C7orf34Q96L11 122 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 PSD2Q9BQI7 771 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 TIMM29Q9BSF4 260 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 DCUN1D5Q9BTE7 237 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 C1QTNF7Q9BXJ2 289 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 ZDHHC5Q9C0B5 715 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 WDR12Q9GZL7 423 aaKnown RBP3.85□□□□□ -1.79
PTPN12-208ENST00000447995 CCDC90BQ9GZT6 254 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 LMAN2LQ9H0V9 348 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 OR52A5Q9H2C5 316 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 RHBGQ9H310 441 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 TMEM245Q9H330 911 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 OR51B5Q9H339 312 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 DUSP21Q9H596 190 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 RMI1Q9H9A7 625 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 ANKHQ9HCJ1 492 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 WASH6PQ9NQA3 447 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 NECTIN3Q9NQS3 549 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 PHPT1Q9NRX4 125 aaPredicted RBP3.85□□□□□ -1.79
PTPN12-208ENST00000447995 THSD1Q9NS62 852 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 TBCCD1Q9NVR7 557 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 ENPP5Q9UJA9 477 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 NDRG4Q9ULP0 352 aaKnown RBP3.85□□□□□ -1.79
PTPN12-208ENST00000447995 CDC14AQ9UNH5 594 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 ABCG2Q9UNQ0 655 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 ICKQ9UPZ9 632 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 COQ6Q9Y2Z9 468 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 MAGED1Q9Y5V3 778 aaPredicted RBP3.85□□□□□ -1.79
PTPN12-208ENST00000447995 ZFC3H1O60293 1989 aaKnown RBP3.85□□□□□ -1.79
PTPN12-208ENST00000447995 SRCAPQ6ZRS2 3230 aa3.85□□□□□ -1.79
PTPN12-208ENST00000447995 NUP210Q8TEM1 1887 aaPredicted RBP3.84□□□□□ -1.79
PTPN12-208ENST00000447995 MTCL1Q9Y4B5 1905 aaKnown RBP3.84□□□□□ -1.79
PTPN12-208ENST00000447995 KRT87PA6NCN2 255 aa3.84□□□□□ -1.79
PTPN12-208ENST00000447995 PRRT4C9JH25 899 aa3.84□□□□□ -1.79
PTPN12-208ENST00000447995 PTGES3LE9PB15 166 aa3.84□□□□□ -1.79
PTPN12-208ENST00000447995 M0R3G1 203 aa3.84□□□□□ -1.79
PTPN12-208ENST00000447995 YY2O15391 372 aa3.84□□□□□ -1.79
PTPN12-208ENST00000447995 NDUFS4O43181 175 aa3.84□□□□□ -1.79
PTPN12-208ENST00000447995 PFDN1O60925 122 aa3.84□□□□□ -1.79
PTPN12-208ENST00000447995 MITFO75030 526 aaPredicted RBP3.84□□□□□ -1.79
PTPN12-208ENST00000447995 CBFA2T3O75081 653 aa3.84□□□□□ -1.79
PTPN12-208ENST00000447995 SERPINB7O75635 380 aa3.84□□□□□ -1.79
PTPN12-208ENST00000447995 CCNB2O95067 398 aa3.84□□□□□ -1.79
PTPN12-208ENST00000447995 GABARAPO95166 117 aa3.84□□□□□ -1.79
PTPN12-208ENST00000447995 KAT7O95251 611 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms