RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 PSME3P61289 254 aa18.32■□□□□ 0.52
SGCE-207ENST00000447873 SERTAD2Q14140 314 aa18.32■□□□□ 0.52
SGCE-207ENST00000447873 DNAL1Q4LDG9 190 aa18.32■□□□□ 0.52
SGCE-207ENST00000447873 SHISA6Q6ZSJ9 500 aa18.32■□□□□ 0.52
SGCE-207ENST00000447873 DEFB107AQ8IZN7 70 aa18.32■□□□□ 0.52
SGCE-207ENST00000447873 PGAM4Q8N0Y7 254 aa18.32■□□□□ 0.52
SGCE-207ENST00000447873 SLC46A1Q96NT5 459 aa18.32■□□□□ 0.52
SGCE-207ENST00000447873 CGREF1Q99674 301 aa18.32■□□□□ 0.52
SGCE-207ENST00000447873 SPRY4Q9C004 299 aa18.32■□□□□ 0.52
SGCE-207ENST00000447873 LRMDAQ9H2I8 198 aa18.32■□□□□ 0.52
SGCE-207ENST00000447873 NECTIN3Q9NQS3 549 aa18.32■□□□□ 0.52
SGCE-207ENST00000447873 SLC6A13Q9NSD5 602 aa18.32■□□□□ 0.52
SGCE-207ENST00000447873 VAPAQ9P0L0 249 aa18.32■□□□□ 0.52
SGCE-207ENST00000447873 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.32■□□□□ 0.52
SGCE-207ENST00000447873 SNX8Q9Y5X2 465 aa18.32■□□□□ 0.52
SGCE-207ENST00000447873 VSTM2BA6NLU5 285 aa18.31■□□□□ 0.52
SGCE-207ENST00000447873 OR10H2O60403 315 aa18.31■□□□□ 0.52
SGCE-207ENST00000447873 PTPN6P29350 595 aa18.31■□□□□ 0.52
SGCE-207ENST00000447873 IGLV3-21P80748 117 aaPredicted RBP18.31■□□□□ 0.52
SGCE-207ENST00000447873 RHAGQ02094 409 aa18.31■□□□□ 0.52
SGCE-207ENST00000447873 BIKQ13323 160 aa18.31■□□□□ 0.52
SGCE-207ENST00000447873 GTDC1Q4AE62 458 aa18.31■□□□□ 0.52
SGCE-207ENST00000447873 MRPL14Q6P1L8 145 aaKnown RBP18.31■□□□□ 0.52
SGCE-207ENST00000447873 LAPTM4BQ86VI4 370 aa18.31■□□□□ 0.52
SGCE-207ENST00000447873 C7orf57Q8NEG2 295 aa18.31■□□□□ 0.52
SGCE-207ENST00000447873 OR9A2Q8NGT5 310 aa18.31■□□□□ 0.52
SGCE-207ENST00000447873 RBM18Q96H35 190 aaKnown RBP18.31■□□□□ 0.52
SGCE-207ENST00000447873 VN1R1Q9GZP7 353 aa18.31■□□□□ 0.52
SGCE-207ENST00000447873 SOX17Q9H6I2 414 aaPredicted RBP18.31■□□□□ 0.52
SGCE-207ENST00000447873 WDR54Q9H977 334 aa18.31■□□□□ 0.52
SGCE-207ENST00000447873 TGFBR3LH3BV60 316 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 ATP1B1P05026 303 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 ZCCHC18P0CG32 403 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 SLC5A2P31639 672 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 PTGER1P34995 402 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 SOAT1P35610 550 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 CDK9P50750 372 aaKnown RBP18.3■□□□□ 0.52
SGCE-207ENST00000447873 C8orf82Q6P1X6 216 aaPredicted RBP18.3■□□□□ 0.52
SGCE-207ENST00000447873 FAM198BQ6UWH4 519 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 TIPARPQ7Z3E1 657 aaKnown RBP18.3■□□□□ 0.52
SGCE-207ENST00000447873 MSRB3Q8IXL7 192 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 ST13P4Q8IZP2 240 aaPredicted RBP18.3■□□□□ 0.52
SGCE-207ENST00000447873 ADCY4Q8NFM4 1077 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 PSMA8Q8TAA3 256 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 ANKRD27Q96NW4 1050 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 DGAT2Q96PD7 388 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 PHF12Q96QT6 1004 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 GPATCH1Q9BRR8 931 aaKnown RBP18.3■□□□□ 0.52
SGCE-207ENST00000447873 CXorf36Q9H7Y0 433 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 SEMA3GQ9NS98 782 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 SLC25A37Q9NYZ2 338 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 NXT1Q9UKK6 140 aaKnown RBP18.3■□□□□ 0.52
SGCE-207ENST00000447873 PCDHGA7Q9Y5G6 932 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 CLDN16Q9Y5I7 305 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 PIEZO1Q92508 2521 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 IDSB3KWA1 339 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 IFNA16P05015 189 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 HEXBP07686 556 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 NT5EP21589 574 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 SLC6A2P23975 617 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 FOXL2P58012 376 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 NCF4Q15080 339 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 NSDHLQ15738 373 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 SPDYE7PQ495Y7 208 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 NANOGP8Q6NSW7 305 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 ASRGL1Q7L266 308 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 KIF2BQ8N4N8 673 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 ESX1Q8N693 406 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 TSLPQ969D9 159 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 PPWD1Q96BP3 646 aaKnown RBP18.3■□□□□ 0.52
SGCE-207ENST00000447873 SLC35A5Q9BS91 424 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 NANOGQ9H9S0 305 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 SPAG4Q9NPE6 437 aa18.3■□□□□ 0.52
SGCE-207ENST00000447873 SIRT3Q9NTG7 399 aaPredicted RBP18.3■□□□□ 0.52
SGCE-207ENST00000447873 IGKV3D-11A0A0A0MRZ8 115 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 TRBV5-3A0A0A0MS03 114 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 C15orf38-AP3S2A0A0A6YYH1 394 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 STMND1H3BQB6 276 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 CNOT3O75175 753 aaKnown RBP18.29■□□□□ 0.52
SGCE-207ENST00000447873 RECKO95980 971 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 CD63P08962 238 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 HOXB9P17482 250 aaPredicted RBP18.29■□□□□ 0.52
SGCE-207ENST00000447873 UQCRC2P22695 453 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 STT3AP46977 705 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 GAB1Q13480 694 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 MAP7Q14244 749 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 LTB4RQ15722 352 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 RUNDC3AQ59EK9 446 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 CPZQ66K79 652 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 TMEM107Q6UX40 140 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 ARPINQ7Z6K5 226 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 NLGN4XQ8N0W4 816 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 CLEC4FQ8N1N0 589 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 PLPP5Q8NEB5 264 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 NLGN4YQ8NFZ3 816 aaPredicted RBP18.29■□□□□ 0.52
SGCE-207ENST00000447873 OR5AK3PQ8NH89 298 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 KAT2AQ92830 837 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 MCUR1Q96AQ8 359 aa18.29■□□□□ 0.52
SGCE-207ENST00000447873 AURKBQ96GD4 344 aaPredicted RBP18.29■□□□□ 0.52
SGCE-207ENST00000447873 SPSB2Q99619 263 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms