RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 OR1N1Q8NGS0 311 aa22.29■■□□□ 1.16
C9orf3-207ENST00000445181 OR6Y1Q8NGX8 325 aa22.29■■□□□ 1.16
C9orf3-207ENST00000445181 C16orf78Q8WTQ4 265 aa22.29■■□□□ 1.16
C9orf3-207ENST00000445181 KLHL29Q96CT2 875 aa22.29■■□□□ 1.16
C9orf3-207ENST00000445181 ART5Q96L15 291 aa22.29■■□□□ 1.16
C9orf3-207ENST00000445181 UTP23Q9BRU9 249 aaKnown RBP22.29■■□□□ 1.16
C9orf3-207ENST00000445181 CNPPD1Q9BV87 410 aa22.29■■□□□ 1.16
C9orf3-207ENST00000445181 LRTM1Q9HBL6 345 aa22.29■■□□□ 1.16
C9orf3-207ENST00000445181 SIRT5Q9NXA8 310 aa22.29■■□□□ 1.16
C9orf3-207ENST00000445181 ANKRD10Q9NXR5 420 aa22.29■■□□□ 1.16
C9orf3-207ENST00000445181 ZNF223Q9UK11 482 aaPredicted RBP22.29■■□□□ 1.16
C9orf3-207ENST00000445181 FCHO1O14526 889 aa22.28■■□□□ 1.16
C9orf3-207ENST00000445181 LYPLA1O75608 230 aaPredicted RBP22.28■■□□□ 1.16
C9orf3-207ENST00000445181 DRD2P14416 443 aa22.28■■□□□ 1.16
C9orf3-207ENST00000445181 H2AFXP16104 143 aaPredicted RBP22.28■■□□□ 1.16
C9orf3-207ENST00000445181 BGNP21810 368 aa22.28■■□□□ 1.16
C9orf3-207ENST00000445181 GRK2P25098 689 aa22.28■■□□□ 1.16
C9orf3-207ENST00000445181 TNFSF10P50591 281 aa22.28■■□□□ 1.16
C9orf3-207ENST00000445181 ABCE1P61221 599 aaKnown RBP22.28■■□□□ 1.16
C9orf3-207ENST00000445181 OC90Q02509 493 aaPredicted RBP22.28■■□□□ 1.16
C9orf3-207ENST00000445181 ZNF763Q0D2J5 394 aa22.28■■□□□ 1.16
C9orf3-207ENST00000445181 MRPL49Q13405 166 aaKnown RBP22.28■■□□□ 1.16
C9orf3-207ENST00000445181 ZNF267Q14586 743 aaPredicted RBP22.28■■□□□ 1.16
C9orf3-207ENST00000445181 HEPACAMQ14CZ8 416 aa22.28■■□□□ 1.16
C9orf3-207ENST00000445181 C6orf163Q5TEZ5 329 aa22.28■■□□□ 1.16
C9orf3-207ENST00000445181 AGBL2Q5U5Z8 902 aa22.28■■□□□ 1.16
C9orf3-207ENST00000445181 RNF165Q6ZSG1 346 aa22.28■■□□□ 1.16
C9orf3-207ENST00000445181 GOLGA6L1Q8N7Z2 621 aa22.28■■□□□ 1.16
C9orf3-207ENST00000445181 ZNF321PQ8N8H1 164 aa22.28■■□□□ 1.16
C9orf3-207ENST00000445181 FAM76AQ8TAV0 307 aa22.28■■□□□ 1.16
C9orf3-207ENST00000445181 DOK4Q8TEW6 326 aa22.28■■□□□ 1.16
C9orf3-207ENST00000445181 C11orf24Q96F05 449 aaPredicted RBP22.28■■□□□ 1.16
C9orf3-207ENST00000445181 SENP5Q96HI0 755 aaPredicted RBP22.28■■□□□ 1.16
C9orf3-207ENST00000445181 TUBB1Q9H4B7 451 aa22.28■■□□□ 1.16
C9orf3-207ENST00000445181 PFDN4Q9NQP4 134 aa22.28■■□□□ 1.16
C9orf3-207ENST00000445181 C1orf109Q9NX04 203 aa22.28■■□□□ 1.16
C9orf3-207ENST00000445181 ZDHHC2Q9UIJ5 367 aa22.28■■□□□ 1.16
C9orf3-207ENST00000445181 CCL27Q9Y4X3 112 aa22.28■■□□□ 1.16
C9orf3-207ENST00000445181 PCDHGA10Q9Y5H3 936 aa22.28■■□□□ 1.16
C9orf3-207ENST00000445181 COPG1Q9Y678 874 aaKnown RBP22.28■■□□□ 1.16
C9orf3-207ENST00000445181 ZNF780BQ9Y6R6 833 aa22.28■■□□□ 1.16
C9orf3-207ENST00000445181 SPENQ96T58 3664 aaKnown RBP22.28■■□□□ 1.16
C9orf3-207ENST00000445181 TRAV17A0A0B4J275 112 aa22.27■■□□□ 1.16
C9orf3-207ENST00000445181 A0A1W2PS29 197 aa22.27■■□□□ 1.16
C9orf3-207ENST00000445181 PIP5K1BO14986 540 aa22.27■■□□□ 1.16
C9orf3-207ENST00000445181 CPMP14384 443 aa22.27■■□□□ 1.16
C9orf3-207ENST00000445181 PORP16435 677 aaPredicted RBP22.27■■□□□ 1.16
C9orf3-207ENST00000445181 GSTM5P46439 218 aa22.27■■□□□ 1.16
C9orf3-207ENST00000445181 MLF1P58340 268 aa22.27■■□□□ 1.16
C9orf3-207ENST00000445181 TUBA3CQ13748 450 aa22.27■■□□□ 1.16
C9orf3-207ENST00000445181 UGT3A2Q3SY77 523 aa22.27■■□□□ 1.16
C9orf3-207ENST00000445181 NOXRED1Q6NXP6 359 aa22.27■■□□□ 1.16
C9orf3-207ENST00000445181 TUBA3EQ6PEY2 450 aa22.27■■□□□ 1.16
C9orf3-207ENST00000445181 ZNF721Q8TF20 911 aa22.27■■□□□ 1.16
C9orf3-207ENST00000445181 METTL2AQ96IZ6 378 aaKnown RBP22.27■■□□□ 1.16
C9orf3-207ENST00000445181 HEY2Q9UBP5 337 aa22.27■■□□□ 1.16
C9orf3-207ENST00000445181 UTS2RQ9UKP6 389 aa22.27■■□□□ 1.16
C9orf3-207ENST00000445181 CES1P1Q9UKY3 287 aa22.27■■□□□ 1.16
C9orf3-207ENST00000445181 DOPEY2Q9Y3R5 2298 aa22.27■■□□□ 1.16
C9orf3-207ENST00000445181 COL12A1Q99715 3063 aa22.26■■□□□ 1.15
C9orf3-207ENST00000445181 RELNP78509 3460 aa22.26■■□□□ 1.15
C9orf3-207ENST00000445181 ITM2AO43736 263 aa22.26■■□□□ 1.15
C9orf3-207ENST00000445181 SKAP2O75563 359 aaPredicted RBP22.26■■□□□ 1.15
C9orf3-207ENST00000445181 NT5EP21589 574 aa22.26■■□□□ 1.15
C9orf3-207ENST00000445181 PRPH2P23942 346 aa22.26■■□□□ 1.15
C9orf3-207ENST00000445181 GALNSP34059 522 aa22.26■■□□□ 1.15
C9orf3-207ENST00000445181 FEN1P39748 380 aaKnown RBP22.26■■□□□ 1.15
C9orf3-207ENST00000445181 SLC1A6P48664 564 aa22.26■■□□□ 1.15
C9orf3-207ENST00000445181 ERVK-8P63133 956 aa22.26■■□□□ 1.15
C9orf3-207ENST00000445181 STX3Q13277 289 aa22.26■■□□□ 1.15
C9orf3-207ENST00000445181 SPRED3Q2MJR0 410 aa22.26■■□□□ 1.15
C9orf3-207ENST00000445181 EIF2S3LQ2VIR3 472 aaKnown RBP22.26■■□□□ 1.15
C9orf3-207ENST00000445181 ZNF750Q32MQ0 723 aa22.26■■□□□ 1.15
C9orf3-207ENST00000445181 GALNTL6Q49A17 601 aa22.26■■□□□ 1.15
C9orf3-207ENST00000445181 CES4AQ5XG92 561 aa22.26■■□□□ 1.15
C9orf3-207ENST00000445181 Q6ZSR9 355 aa22.26■■□□□ 1.15
C9orf3-207ENST00000445181 GALNT12Q8IXK2 581 aa22.26■■□□□ 1.15
C9orf3-207ENST00000445181 OR2T11Q8NH01 316 aa22.26■■□□□ 1.15
C9orf3-207ENST00000445181 ARL8AQ96BM9 186 aa22.26■■□□□ 1.15
C9orf3-207ENST00000445181 FBXL20Q96IG2 436 aa22.26■■□□□ 1.15
C9orf3-207ENST00000445181 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.26■■□□□ 1.15
C9orf3-207ENST00000445181 ERVK-19Q9WJR5 959 aa22.26■■□□□ 1.15
C9orf3-207ENST00000445181 CYSRT1A8MQ03 144 aa22.25■■□□□ 1.15
C9orf3-207ENST00000445181 HRKO00198 91 aa22.25■■□□□ 1.15
C9orf3-207ENST00000445181 PRKNO60260 465 aaPredicted RBP22.25■■□□□ 1.15
C9orf3-207ENST00000445181 AGFG2O95081 481 aa22.25■■□□□ 1.15
C9orf3-207ENST00000445181 CSNK2A2P19784 350 aaPredicted RBP22.25■■□□□ 1.15
C9orf3-207ENST00000445181 CD96P40200 585 aa22.25■■□□□ 1.15
C9orf3-207ENST00000445181 SLC18A1P54219 525 aa22.25■■□□□ 1.15
C9orf3-207ENST00000445181 RNF4P78317 190 aa22.25■■□□□ 1.15
C9orf3-207ENST00000445181 C2orf80Q0P641 193 aa22.25■■□□□ 1.15
C9orf3-207ENST00000445181 TMEM156Q8N614 296 aa22.25■■□□□ 1.15
C9orf3-207ENST00000445181 HORMAD2Q8N7B1 307 aa22.25■■□□□ 1.15
C9orf3-207ENST00000445181 OR5L2Q8NGL0 311 aa22.25■■□□□ 1.15
C9orf3-207ENST00000445181 EXOSC8Q96B26 276 aaKnown RBP22.25■■□□□ 1.15
C9orf3-207ENST00000445181 ZNF395Q9H8N7 513 aaPredicted RBP22.25■■□□□ 1.15
C9orf3-207ENST00000445181 LIN28AQ9H9Z2 209 aaKnown RBP22.25■■□□□ 1.15
C9orf3-207ENST00000445181 GIMAP4Q9NUV9 329 aa22.25■■□□□ 1.15
C9orf3-207ENST00000445181 NTNG1Q9Y2I2 539 aa22.25■■□□□ 1.15
C9orf3-207ENST00000445181 PTPN13Q12923 2485 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms