RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 HSD17B7P56937 341 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 SQLEQ14534 574 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 UGT8Q16880 541 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 AGKQ53H12 422 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 ZNF385BQ569K4 471 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 METTL21CQ5VZV1 264 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 QSOX2Q6ZRP7 698 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 LANCL3Q6ZV70 420 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 R3HCC1LQ7Z5L2 792 aaKnown RBP16.13■□□□□ 0.17
LIME1-202ENST00000444951 DOK4Q8TEW6 326 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 METTL21AQ8WXB1 218 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 ANKRD9Q96BM1 317 aaPredicted RBP16.13■□□□□ 0.17
LIME1-202ENST00000444951 MESP1Q9BRJ9 268 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 ALOXE3Q9BYJ1 711 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 GIMAP4Q9NUV9 329 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 CES1P1Q9UKY3 287 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 PSME2Q9UL46 239 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 ENTPD4Q9Y227 616 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 MMACHCQ9Y4U1 282 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 ZNF780BQ9Y6R6 833 aa16.13■□□□□ 0.17
LIME1-202ENST00000444951 BLACEA4D250 179 aa16.12■□□□□ 0.17
LIME1-202ENST00000444951 FCHO1O14526 889 aa16.12■□□□□ 0.17
LIME1-202ENST00000444951 ANKRD28O15084 1053 aa16.12■□□□□ 0.17
LIME1-202ENST00000444951 ALOX12BO75342 701 aa16.12■□□□□ 0.17
LIME1-202ENST00000444951 GPR75O95800 540 aa16.12■□□□□ 0.17
LIME1-202ENST00000444951 IFNA16P05015 189 aa16.12■□□□□ 0.17
LIME1-202ENST00000444951 LAMP1P11279 417 aa16.12■□□□□ 0.17
LIME1-202ENST00000444951 IL12AP29459 219 aa16.12■□□□□ 0.17
LIME1-202ENST00000444951 PPP2R1BP30154 601 aa16.12■□□□□ 0.17
LIME1-202ENST00000444951 XKP51811 444 aa16.12■□□□□ 0.17
LIME1-202ENST00000444951 CLNS1AP54105 237 aaKnown RBP16.12■□□□□ 0.17
LIME1-202ENST00000444951 EEF1A2Q05639 463 aaKnown RBP16.12■□□□□ 0.17
LIME1-202ENST00000444951 CPTPQ5TA50 214 aa16.12■□□□□ 0.17
LIME1-202ENST00000444951 MTDHQ86UE4 582 aaKnown RBP16.12■□□□□ 0.17
LIME1-202ENST00000444951 SCUBE1Q8IWY4 988 aa16.12■□□□□ 0.17
LIME1-202ENST00000444951 RIMKLAQ8IXN7 391 aa16.12■□□□□ 0.17
LIME1-202ENST00000444951 CCDC197Q8NCU1 140 aa16.12■□□□□ 0.17
LIME1-202ENST00000444951 CIDECQ96AQ7 238 aaPredicted RBP16.12■□□□□ 0.17
LIME1-202ENST00000444951 PPWD1Q96BP3 646 aaKnown RBP16.12■□□□□ 0.17
LIME1-202ENST00000444951 C8orf44Q96CB5 159 aa16.12■□□□□ 0.17
LIME1-202ENST00000444951 BBS4Q96RK4 519 aa16.12■□□□□ 0.17
LIME1-202ENST00000444951 PRPF18Q99633 342 aaKnown RBP16.12■□□□□ 0.17
LIME1-202ENST00000444951 NMUR2Q9GZQ4 415 aa16.12■□□□□ 0.17
LIME1-202ENST00000444951 SDR39U1Q9NRG7 319 aaPredicted RBP16.12■□□□□ 0.17
LIME1-202ENST00000444951 PNO1Q9NRX1 252 aaKnown RBP16.12■□□□□ 0.17
LIME1-202ENST00000444951 ZIM2Q9NZV7 527 aa16.12■□□□□ 0.17
LIME1-202ENST00000444951 CCDC167Q9P0B6 97 aa16.12■□□□□ 0.17
LIME1-202ENST00000444951 ARMCX1Q9P291 453 aa16.12■□□□□ 0.17
LIME1-202ENST00000444951 ATP6V1HQ9UI12 483 aa16.12■□□□□ 0.17
LIME1-202ENST00000444951 TUBD1Q9UJT1 453 aa16.12■□□□□ 0.17
LIME1-202ENST00000444951 CCDC88CQ9P219 2028 aa16.12■□□□□ 0.17
LIME1-202ENST00000444951 NBPF19A0A087WUL8 3843 aa16.11■□□□□ 0.17
LIME1-202ENST00000444951 IGHV3-20A0A0C4DH32 117 aa16.11■□□□□ 0.17
LIME1-202ENST00000444951 NR5A2O00482 541 aa16.11■□□□□ 0.17
LIME1-202ENST00000444951 OR10H2O60403 315 aa16.11■□□□□ 0.17
LIME1-202ENST00000444951 RPL3P39023 403 aaKnown RBP16.11■□□□□ 0.17
LIME1-202ENST00000444951 DGKQP52824 942 aa16.11■□□□□ 0.17
LIME1-202ENST00000444951 OR4D2P58180 307 aa16.11■□□□□ 0.17
LIME1-202ENST00000444951 IL10RAQ13651 578 aa16.11■□□□□ 0.17
LIME1-202ENST00000444951 FAM174BQ3ZCQ3 159 aa16.11■□□□□ 0.17
LIME1-202ENST00000444951 OR4F3Q6IEY1 312 aa16.11■□□□□ 0.17
LIME1-202ENST00000444951 PLPP5Q8NEB5 264 aa16.11■□□□□ 0.17
LIME1-202ENST00000444951 C9orf43Q8TAL5 461 aaPredicted RBP16.11■□□□□ 0.17
LIME1-202ENST00000444951 MTERF3Q96E29 417 aa16.11■□□□□ 0.17
LIME1-202ENST00000444951 ABHD17AQ96GS6 310 aa16.11■□□□□ 0.17
LIME1-202ENST00000444951 SLC35C2Q9NQQ7 365 aa16.11■□□□□ 0.17
LIME1-202ENST00000444951 SAR1AQ9NR31 198 aa16.11■□□□□ 0.17
LIME1-202ENST00000444951 SEMA3GQ9NS98 782 aa16.11■□□□□ 0.17
LIME1-202ENST00000444951 EHD3Q9NZN3 535 aa16.11■□□□□ 0.17
LIME1-202ENST00000444951 K7EM74 188 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 PDPK1O15530 556 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 CCDC22O60826 627 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 CREG1O75629 220 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 CPMP14384 443 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 CD1EP15812 388 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 TNNI3P19429 210 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 CSNK2A2P19784 350 aaPredicted RBP16.1■□□□□ 0.17
LIME1-202ENST00000444951 NTSP30990 170 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 S100A3P33764 101 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 ATP4BP51164 291 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 POLR2JP52435 117 aaKnown RBP16.1■□□□□ 0.17
LIME1-202ENST00000444951 DUSP2Q05923 314 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 PDE7AQ13946 482 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 IGFBP7Q16270 282 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 SPANXN4Q5MJ08 99 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 GK5Q6ZS86 529 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 ANKRD37Q7Z713 158 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 CCDC116Q8IYX3 515 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 APOBEC4Q8WW27 367 aaKnown RBP16.1■□□□□ 0.17
LIME1-202ENST00000444951 CNRIP1Q96F85 164 aaPredicted RBP16.1■□□□□ 0.17
LIME1-202ENST00000444951 DGAT2Q96PD7 388 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 EFHD1Q9BUP0 239 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 DUSP26Q9BV47 211 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 ZNF385DQ9H6B1 395 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 ATAD3AQ9NVI7 634 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 MAPRE3Q9UPY8 281 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 PCDHGA6Q9Y5G7 932 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 SEC16AO15027 2179 aa16.1■□□□□ 0.17
LIME1-202ENST00000444951 IGKV3D-11A0A0A0MRZ8 115 aa16.09■□□□□ 0.17
LIME1-202ENST00000444951 CDC14CA4D256 554 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms