RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 RPRMLQ8N4K4 120 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 MARVELD2Q8N4S9 558 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 SIMC1Q8NDZ2 872 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 TRPC4APQ8TEL6 797 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 AGAP11Q8TF27 550 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 TANKQ92844 425 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 ATP6V1E2Q96A05 226 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 REPS1Q96D71 796 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 FBXL20Q96IG2 436 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 SERPINI1Q99574 410 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 CNPPD1Q9BV87 410 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 TTTY12Q9BZ98 90 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 PROK2Q9HC23 129 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 SH2D2AQ9NP31 389 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 MS4A12Q9NXJ0 267 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 MEMO1Q9Y316 297 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 DOCK7Q96N67 2140 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 SYNDIG1LA6NDD5 238 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 KLRC4-KLRK1H3BQV0 150 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 GLSO94925 669 aaPredicted RBP10.04□□□□□ -0.8
SF3A1-203ENST00000444440 LRATO95237 230 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 CELA3AP09093 270 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 PYGBP11216 843 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 ABOP16442 354 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 TAC1P20366 129 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 PIGAP37287 484 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 SLC37A1P57057 533 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 PLIN5Q00G26 463 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 CLCQ05315 142 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 RBPJQ06330 500 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 FOXO1Q12778 655 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 TBL3Q12788 808 aaKnown RBP10.04□□□□□ -0.8
SF3A1-203ENST00000444440 DUSP8Q13202 625 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 ZNF267Q14586 743 aaPredicted RBP10.04□□□□□ -0.8
SF3A1-203ENST00000444440 EBPQ15125 230 aaKnown RBP10.04□□□□□ -0.8
SF3A1-203ENST00000444440 SPRED3Q2MJR0 410 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 ZNF791Q3KP31 576 aaPredicted RBP10.04□□□□□ -0.8
SF3A1-203ENST00000444440 EMC4Q5J8M3 183 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 SP5Q6BEB4 398 aaPredicted RBP10.04□□□□□ -0.8
SF3A1-203ENST00000444440 TTC19Q6DKK2 380 aaPredicted RBP10.04□□□□□ -0.8
SF3A1-203ENST00000444440 FAM180BQ6P0A1 224 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 SH2D5Q6ZV89 423 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 COMMD6Q7Z4G1 85 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 CD163Q86VB7 1156 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 METTL4Q8N3J2 472 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 ZNF808Q8N4W9 903 aaPredicted RBP10.04□□□□□ -0.8
SF3A1-203ENST00000444440 POGLUT1Q8NBL1 392 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 NUBPLQ8TB37 319 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 ACMSDQ8TDX5 336 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 KCNA7Q96RP8 456 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 DMRTA2Q96SC8 542 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 CENPKQ9BS16 269 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 DEFB127Q9H1M4 99 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 C12orf65Q9H3J6 166 aaKnown RBP10.04□□□□□ -0.8
SF3A1-203ENST00000444440 CXorf21Q9HAI6 301 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 TIMMDC1Q9NPL8 285 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 TUBA8Q9NY65 449 aaPredicted RBP10.04□□□□□ -0.8
SF3A1-203ENST00000444440 COPS7AQ9UBW8 275 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 TBK1Q9UHD2 729 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 DCDC2Q9UHG0 476 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 CES1P1Q9UKY3 287 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 SLC12A4Q9UP95 1085 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 DTX4Q9Y2E6 619 aa10.04□□□□□ -0.8
SF3A1-203ENST00000444440 MANBAO00462 879 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 SUPT7LO94864 414 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 OTCP00480 354 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 GSTA1P08263 222 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 COX7A2P14406 83 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 S1PR1P21453 382 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 TLX1P31314 330 aaPredicted RBP10.03□□□□□ -0.8
SF3A1-203ENST00000444440 MAGEA5P43359 124 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 PPIAP62937 165 aaKnown RBP10.03□□□□□ -0.8
SF3A1-203ENST00000444440 RAE1P78406 368 aaKnown RBP10.03□□□□□ -0.8
SF3A1-203ENST00000444440 MGAT2Q10469 447 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 IFT88Q13099 833 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 MPEG1Q2M385 716 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.03□□□□□ -0.83e-7■□□□□ 10.8
SF3A1-203ENST00000444440 NDUFAF5Q5TEU4 345 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 OR52E8Q6IFG1 317 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 TMEM64Q6YI46 380 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 BNC2Q6ZN30 1099 aaPredicted RBP10.03□□□□□ -0.8
SF3A1-203ENST00000444440 RTL4Q6ZR62 310 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 GPALPP1Q8IXQ4 340 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 TMEM251Q8N6I4 163 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 CDYL2Q8N8U2 506 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 ZNF441Q8N8Z8 693 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 FAM57AQ8TBR7 257 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 SELENOMQ8WWX9 145 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 RIT1Q92963 219 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 TM4SF18Q96CE8 201 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 RBM18Q96H35 190 aaKnown RBP10.03□□□□□ -0.8
SF3A1-203ENST00000444440 GAL3ST4Q96RP7 486 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 WWTR1Q9GZV5 400 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 ELOVL6Q9H5J4 265 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 ZDHHC11Q9H8X9 412 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 ANKZF1Q9H8Y5 726 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 TNFRSF12AQ9NP84 129 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 TNFRSF10DQ9UBN6 386 aa10.03□□□□□ -0.8
SF3A1-203ENST00000444440 SUCOQ9UBS9 1254 aaKnown RBP10.03□□□□□ -0.8
SF3A1-203ENST00000444440 TRPS1Q9UHF7 1281 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms