RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 GAB1Q13480 694 aa13.57□□□□□ -0.24
MRPL40-202ENST00000443660 HIST2H2ACQ16777 129 aaPredicted RBP13.57□□□□□ -0.24
MRPL40-202ENST00000443660 SPANXN3Q5MJ09 141 aa13.57□□□□□ -0.24
MRPL40-202ENST00000443660 HIST2H2AA3Q6FI13 130 aa13.57□□□□□ -0.24
MRPL40-202ENST00000443660 RNF111Q6ZNA4 994 aa13.57□□□□□ -0.24
MRPL40-202ENST00000443660 VN1R5Q7Z5H4 357 aa13.57□□□□□ -0.24
MRPL40-202ENST00000443660 GALNT7Q86SF2 657 aa13.57□□□□□ -0.24
MRPL40-202ENST00000443660 CNTN4Q8IWV2 1026 aa13.57□□□□□ -0.24
MRPL40-202ENST00000443660 RILPQ96NA2 401 aa13.57□□□□□ -0.24
MRPL40-202ENST00000443660 KRT12Q99456 494 aa13.57□□□□□ -0.24
MRPL40-202ENST00000443660 WWTR1Q9GZV5 400 aa13.57□□□□□ -0.24
MRPL40-202ENST00000443660 UBQLN3Q9H347 655 aa13.57□□□□□ -0.24
MRPL40-202ENST00000443660 EHD1Q9H4M9 534 aa13.57□□□□□ -0.24
MRPL40-202ENST00000443660 ZNF490Q9ULM2 529 aaPredicted RBP13.57□□□□□ -0.24
MRPL40-202ENST00000443660 C15orf41Q9Y2V0 281 aa13.57□□□□□ -0.24
MRPL40-202ENST00000443660 ARHGAP21Q5T5U3 1957 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 OR6C76A6NM76 312 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 HRKO00198 91 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 RCBTB2O95199 551 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 ACTL6AO96019 429 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 TLX1P31314 330 aaPredicted RBP13.56□□□□□ -0.24
MRPL40-202ENST00000443660 SLC6A12P48065 614 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 IGLV3-21P80748 117 aaPredicted RBP13.56□□□□□ -0.24
MRPL40-202ENST00000443660 LAPTM5Q13571 262 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 ZNF267Q14586 743 aaPredicted RBP13.56□□□□□ -0.24
MRPL40-202ENST00000443660 RPS6KA2Q15349 733 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 C18orf21Q32NC0 220 aaPredicted RBP13.56□□□□□ -0.24
MRPL40-202ENST00000443660 EIPR1Q53HC9 387 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 PAGE2BQ5JRK9 111 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 WIPI1Q5MNZ9 446 aaPredicted RBP13.56□□□□□ -0.24
MRPL40-202ENST00000443660 SCIMPQ6UWF3 145 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 C20orf204Q6ZNR8 217 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 TMEM139Q8IV31 216 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 ZNF441Q8N8Z8 693 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 NAT8LQ8N9F0 302 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 BBOF1Q8ND07 529 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 TANKQ92844 425 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 MAGOHBQ96A72 148 aaKnown RBP13.56□□□□□ -0.24
MRPL40-202ENST00000443660 INTS12Q96CB8 462 aaKnown RBP13.56□□□□□ -0.24
MRPL40-202ENST00000443660 RHBDF1Q96CC6 855 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 PTCD3Q96EY7 689 aaKnown RBP13.56□□□□□ -0.24
MRPL40-202ENST00000443660 PIK3IP1Q96FE7 263 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 NAT9Q9BTE0 207 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 ANGPTL4Q9BY76 406 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 PHACTR1Q9C0D0 580 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 RPF2Q9H7B2 306 aaKnown RBP13.56□□□□□ -0.24
MRPL40-202ENST00000443660 MS4A12Q9NXJ0 267 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 CTNNAL1Q9UBT7 734 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 RTTNQ86VV8 2226 aa13.56□□□□□ -0.24
MRPL40-202ENST00000443660 C2orf92A0A1B0GVN3 265 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 A8MXE2 369 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 CTIFO43310 598 aaKnown RBP13.55□□□□□ -0.24
MRPL40-202ENST00000443660 OR10H2O60403 315 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 CPN1P15169 458 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 ALOX15P16050 662 aaPredicted RBP13.55□□□□□ -0.24
MRPL40-202ENST00000443660 ZNF37AP17032 561 aaPredicted RBP13.55□□□□□ -0.24
MRPL40-202ENST00000443660 HIST1H1TP22492 207 aaPredicted RBP13.55□□□□□ -0.24
MRPL40-202ENST00000443660 MC3RP41968 323 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 TMED10P49755 219 aaKnown RBP13.55□□□□□ -0.24
MRPL40-202ENST00000443660 NAGLUP54802 743 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 HERVK_113P63132 956 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 ERVK-8P63133 956 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 PCDH1Q08174 1060 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 TMEM35AQ53FP2 167 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 TEDDM1Q5T9Z0 273 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 HLA-DQA1Q5Y7H0 255 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 ADNP2Q6IQ32 1131 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 ZNF793Q6ZN11 406 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 DGAT2L6Q6ZPD8 337 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 UBE3DQ7Z6J8 389 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 ADAMTSL2Q86TH1 951 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 PPIL6Q8IXY8 311 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 ST13P4Q8IZP2 240 aaPredicted RBP13.55□□□□□ -0.24
MRPL40-202ENST00000443660 SPPL2AQ8TCT8 520 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 DOK4Q8TEW6 326 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 SLC44A1Q8WWI5 657 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 RIT1Q92963 219 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 WNT2BQ93097 391 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 UCN3Q969E3 161 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 CERS2Q96G23 380 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 VPS39Q96JC1 886 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 PELOQ9BRX2 385 aaKnown RBP13.55□□□□□ -0.24
MRPL40-202ENST00000443660 EFCAB11Q9BUY7 163 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 ERVK-6Q9BXR3 956 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 RBSNQ9H1K0 784 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 CNOT10Q9H9A5 744 aaKnown RBP13.55□□□□□ -0.24
MRPL40-202ENST00000443660 SNX15Q9NRS6 342 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 DNAJC11Q9NVH1 559 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 TEX10Q9NXF1 929 aaPredicted RBP13.55□□□□□ -0.24
MRPL40-202ENST00000443660 FETUBQ9UGM5 382 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 ERVK-19Q9WJR5 959 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 TESMINQ9Y4I5 508 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 NPFFR2Q9Y5X5 522 aa13.55□□□□□ -0.24
MRPL40-202ENST00000443660 EML6Q6ZMW3 1958 aa13.54□□□□□ -0.24
MRPL40-202ENST00000443660 NCF1BA6NI72 391 aaPredicted RBP13.54□□□□□ -0.24
MRPL40-202ENST00000443660 NCF1CA8MVU1 366 aaPredicted RBP13.54□□□□□ -0.24
MRPL40-202ENST00000443660 H0Y3Z8 333 aa13.54□□□□□ -0.24
MRPL40-202ENST00000443660 RTCAO00442 366 aaKnown RBP13.54□□□□□ -0.24
MRPL40-202ENST00000443660 CDH16O75309 829 aa13.54□□□□□ -0.24
MRPL40-202ENST00000443660 IFNA2P01563 188 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms