RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.79□□□□□ -1.64
HERC1-201ENST00000443617 FBXO15Q8NCQ5 510 aaPredicted RBP4.79□□□□□ -1.64
HERC1-201ENST00000443617 RASD1Q9Y272 281 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 GSTM3P21266 225 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 ACVRL1P37023 503 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 SLC11A2P49281 568 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 PGDP52209 483 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 SMSP52788 366 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 NCEH1Q6PIU2 408 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 SOWAHBA6NEL2 793 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 EBLN1P0CF75 366 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 RAP2BP61225 183 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 STX4Q12846 297 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 KRT33BQ14525 404 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 RGNQ15493 299 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 C19orf48Q6RUI8 117 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 GULP1Q9UBP9 304 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 MRTO4Q9UKD2 239 aaKnown RBP4.79□□□□□ -1.64
HERC1-201ENST00000443617 POMT2Q9UKY4 750 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 ZNF638Q14966 1978 aaKnown RBP4.79□□□□□ -1.64
HERC1-201ENST00000443617 A0A0B4J293 547 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 FABP1P07148 127 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 SNTB2Q13425 540 aaKnown RBP4.79□□□□□ -1.64
HERC1-201ENST00000443617 LGALSLQ3ZCW2 172 aaPredicted RBP4.79□□□□□ -1.64
HERC1-201ENST00000443617 ARL9Q6T311 187 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 ZNF454Q8N9F8 522 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 CD200R1Q8TD46 325 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 CNOT9Q92600 299 aaKnown RBP4.79□□□□□ -1.64
HERC1-201ENST00000443617 RNF31Q96EP0 1072 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 SECISBP2Q96T21 854 aaKnown RBP4.79□□□□□ -1.64
HERC1-201ENST00000443617 LOC105369274A0A096LPK9 316 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 ADAM11O75078 769 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 C6orf47O95873 294 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 IGFBP1P08833 259 aaPredicted RBP4.79□□□□□ -1.64
HERC1-201ENST00000443617 ICAM2P13598 275 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 CLEC12AQ5QGZ9 265 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 LINGO4Q6UY18 593 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 TMUB2Q71RG4 321 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 OR4N4Q8N0Y3 316 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 RPLP0P6Q8NHW5 317 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 THAP6Q8TBB0 222 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 CLP1Q92989 425 aaKnown RBP4.79□□□□□ -1.64
HERC1-201ENST00000443617 HGDQ93099 445 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 TMEM185BQ9H7F4 350 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 KCTD5Q9NXV2 234 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 MOXD2PA6NHM9 499 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 GTPBP1O00178 669 aaKnown RBP4.79□□□□□ -1.64
HERC1-201ENST00000443617 PEX14O75381 377 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 PVALBP20472 110 aaPredicted RBP4.79□□□□□ -1.64
HERC1-201ENST00000443617 SLC6A1P30531 599 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 PSMA6P60900 246 aaKnown RBP4.79□□□□□ -1.64
HERC1-201ENST00000443617 ZXDBP98169 803 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 VEZF1Q14119 521 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 LRIF1Q5T3J3 769 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 SDHAF4Q5VUM1 108 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 FAM124AQ86V42 546 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 SYT14Q8NB59 555 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 MED8Q96G25 268 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 C10orf90Q96M02 699 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 SCML1Q9UN30 329 aa4.79□□□□□ -1.64
HERC1-201ENST00000443617 TRAV20A0A0B4J274 112 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 D6RAR5 112 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 CELP19835 753 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 COL19A1Q14993 1142 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 CTSL3PQ5NE16 218 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 MFSD14CQ5VZR4 134 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 FBXL22Q6P050 247 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 MBOAT1Q6ZNC8 495 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 HS6ST3Q8IZP7 471 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 PIGKQ92643 395 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 FATE1Q969F0 183 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 TRIB3Q96RU7 358 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 GPN3Q9UHW5 284 aaPredicted RBP4.78□□□□□ -1.64
HERC1-201ENST00000443617 F5H5T6 163 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 MT-ND4P03905 459 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 ACPPP15309 386 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 CDKN1CP49918 316 aaPredicted RBP4.78□□□□□ -1.64
HERC1-201ENST00000443617 CLCNKAP51800 687 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 OCLNQ16625 522 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 SYT14P1Q58G82 188 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 CORO6Q6QEF8 472 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 CXXC5Q7LFL8 322 aaKnown RBP4.78□□□□□ -1.64
HERC1-201ENST00000443617 ADAMTS14Q8WXS8 1223 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 NPAS1Q99742 590 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 GABRQQ9UN88 632 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 KIF13AQ9H1H9 1805 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 SLC16A1P53985 500 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 TAP2Q03519 686 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 NDUFAF6Q330K2 333 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 ATP13A5Q4VNC0 1218 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 SLC25A25Q6KCM7 469 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 ALKAL1Q6UXT8 129 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 IZUMO1Q8IYV9 350 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 SVBPQ8N300 66 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 FAM26EQ8N5C1 309 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 PIGXQ8TBF5 258 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 GIMAP1Q8WWP7 306 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 ZNF285Q96NJ3 590 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 DISC1C4P0D8 188 aa4.78□□□□□ -1.64
HERC1-201ENST00000443617 EPORP19235 508 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms