RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 FCRLBQ6BAA4 426 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 PRICKLE2Q7Z3G6 844 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 MMP21Q8N119 569 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 BEST3Q8N1M1 668 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 ZNF781Q8N8C0 355 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 Q8NA96 180 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 OR5L2Q8NGL0 311 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 PUM2Q8TB72 1066 aaKnown RBP eCLIP11□□□□□ -0.65
HSPG2-206ENST00000439717 ZNF721Q8TF20 911 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 SENP5Q96HI0 755 aaPredicted RBP11□□□□□ -0.65
HSPG2-206ENST00000439717 NPAS2Q99743 824 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 C20orf27Q9GZN8 174 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 ACBD3Q9H3P7 528 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 CXorf21Q9HAI6 301 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 MYNNQ9NPC7 610 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 SLAMF7Q9NQ25 335 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 RYDENQ9NUL5 291 aaKnown RBP11□□□□□ -0.65
HSPG2-206ENST00000439717 THAP1Q9NVV9 213 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 PLA2G3Q9NZ20 509 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 HEY2Q9UBP5 337 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 ZNF223Q9UK11 482 aaPredicted RBP11□□□□□ -0.65
HSPG2-206ENST00000439717 UTS2RQ9UKP6 389 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 POLR3HQ9Y535 204 aaPredicted RBP11□□□□□ -0.65
HSPG2-206ENST00000439717 COL6A6A6NMZ7 2263 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 CFAP46Q8IYW2 2715 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 TRAV17A0A0B4J275 112 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 OR6C76A6NM76 312 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 SLC28A2O43868 658 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 SNNO75324 88 aaPredicted RBP10.99□□□□□ -0.65
HSPG2-206ENST00000439717 ERAL1O75616 437 aaKnown RBP10.99□□□□□ -0.65
HSPG2-206ENST00000439717 MAPK1P28482 360 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 TRHRP34981 398 aaPredicted RBP10.99□□□□□ -0.65
HSPG2-206ENST00000439717 RPL14P50914 215 aaKnown RBP10.99□□□□□ -0.65
HSPG2-206ENST00000439717 RNF4P78317 190 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 C2orf80Q0P641 193 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 TUBA3CQ13748 450 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 GALNTL6Q49A17 601 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 ATP6AP1LQ52LC2 224 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 RFTN2Q52LD8 501 aaPredicted RBP10.99□□□□□ -0.65
HSPG2-206ENST00000439717 TTMPQ5BVD1 217 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 C6orf163Q5TEZ5 329 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 FAM71E1Q6IPT2 247 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 RPUSD3Q6P087 351 aaKnown RBP10.99□□□□□ -0.65
HSPG2-206ENST00000439717 TUBA3EQ6PEY2 450 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 DGAT2L6Q6ZPD8 337 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 GALNT12Q8IXK2 581 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 HORMAD2Q8N7B1 307 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 SUN3Q8TAQ9 357 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 KLHL29Q96CT2 875 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 C19orf60Q96EN9 201 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 ZNF681Q96N22 645 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 SORT1Q99523 831 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 UTP23Q9BRU9 249 aaKnown RBP10.99□□□□□ -0.65
HSPG2-206ENST00000439717 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.99□□□□□ -0.65
HSPG2-206ENST00000439717 EPN3Q9H201 632 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 MANSC1Q9H8J5 431 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 ZNF395Q9H8N7 513 aaPredicted RBP10.99□□□□□ -0.65
HSPG2-206ENST00000439717 GIMAP4Q9NUV9 329 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 TAS2R7Q9NYW3 318 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 YARS2Q9Y2Z4 477 aaKnown RBP10.99□□□□□ -0.65
HSPG2-206ENST00000439717 PCDHGA10Q9Y5H3 936 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 CPAMD8Q8IZJ3 1885 aa10.99□□□□□ -0.65
HSPG2-206ENST00000439717 A0A1W2PS29 197 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 TTLL8A6PVC2 850 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 GABRR3A8MPY1 467 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 KLF11O14901 512 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 MAN1A2O60476 641 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 PRAMEF2O60811 474 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 SKAP2O75563 359 aaPredicted RBP10.98□□□□□ -0.65
HSPG2-206ENST00000439717 SASH3O75995 380 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 NT5EP21589 574 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 FEN1P39748 380 aaKnown RBP10.98□□□□□ -0.65
HSPG2-206ENST00000439717 ERVK-8P63133 956 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 RPL38P63173 70 aaKnown RBP10.98□□□□□ -0.65
HSPG2-206ENST00000439717 MAP4K2Q12851 820 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 ZNF267Q14586 743 aaPredicted RBP10.98□□□□□ -0.65
HSPG2-206ENST00000439717 CEBPEQ15744 281 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 SMU1Q2TAY7 513 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 ZNF750Q32MQ0 723 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 RNF111Q6ZNA4 994 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 GPALPP1Q8IXQ4 340 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 LRRC25Q8N386 305 aaPredicted RBP10.98□□□□□ -0.65
HSPG2-206ENST00000439717 ZNF321PQ8N8H1 164 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 CATSPER1Q8NEC5 780 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 OR7G1Q8NGA0 311 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 CDC26Q8NHZ8 85 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 NUBPLQ8TB37 319 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 CNRIP1Q96F85 164 aaPredicted RBP10.98□□□□□ -0.65
HSPG2-206ENST00000439717 ZNF764Q96H86 408 aaPredicted RBP10.98□□□□□ -0.65
HSPG2-206ENST00000439717 C3orf30Q96M34 536 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 CNPPD1Q9BV87 410 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 TRIM45Q9H8W5 580 aaPredicted RBP10.98□□□□□ -0.65
HSPG2-206ENST00000439717 MIEF1Q9NQG6 463 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 SLC35C2Q9NQQ7 365 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 MYOTQ9UBF9 498 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 ERVK-19Q9WJR5 959 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 ENTPD4Q9Y227 616 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 PCDHGB6Q9Y5F9 930 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 CSAG2Q9Y5P2 127 aa10.98□□□□□ -0.65
HSPG2-206ENST00000439717 ATP6AP2A0A1C7CYW4 349 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms