RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 CENPBP07199 599 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 OR2T7P0C7T2 308 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 JAK1P23458 1154 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 PDHA2P29803 388 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 ACSL1P33121 698 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 COPB2P35606 906 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 ETV5P41161 510 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 ARSEP51690 589 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 KRTAP10-1P60331 282 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 ACTG1P63261 375 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 SIRPAP78324 504 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 ZNF415Q09FC8 603 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 FCHO2Q0JRZ9 810 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 LMOD3Q0VAK6 560 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 SHROOM1Q2M3G4 852 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 EIPR1Q53HC9 387 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 DMRTC1Q5HYR2 192 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 SLC35D3Q5M8T2 416 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 LCE1CQ5T751 118 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 SNX30Q5VWJ9 437 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 SERINC5Q86VE9 423 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 FAM131BQ86XD5 332 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 FGFRL1Q8N441 504 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 TYMSOSQ8TAI1 123 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 RFT1Q96AA3 541 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 DHX58Q96C10 678 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 ZNF559Q9BR84 538 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 TMEM121Q9BTD3 319 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 SLC26A6Q9BXS9 759 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 HOXD1Q9GZZ0 328 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 ZHX3Q9H4I2 956 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 GPN1Q9HCN4 374 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 GKN1Q9NS71 199 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 C19orf25Q9UFG5 118 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 ZNF148Q9UQR1 794 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 FOCADQ5VW36 1801 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 ARID1AO14497 2285 aa2.19□□□□□ -2.06
HMGB1P18-201ENST00000438801 TRIM64A6NGJ6 449 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 TRIM64BA6NI03 449 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 H0YAE9 185 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 LAD1O00515 517 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 TSPAN1O60635 241 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 GALR3O60755 368 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 CEACAM4O75871 244 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 TBX18O95935 607 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 PRB2P02812 416 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 PRKAR1AP10644 381 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 RPL35AP18077 110 aaKnown RBP2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 SLC9A3P48764 834 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 IHHQ14623 411 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 DEFB109BQ30KR1 87 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 JAKMIP3Q5VZ66 844 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 VITQ6UXI7 678 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 CDHR3Q6ZTQ4 885 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 C15orf52Q6ZUT6 534 aaKnown RBP2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 AACSQ86V21 672 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 ADGRF2Q8IZF7 708 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 NME8Q8N427 588 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 FBXO39Q8N4B4 442 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 EID2Q8N6I1 236 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 DEPDC1BQ8WUY9 529 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 CNRIP1Q96F85 164 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 CCDC34Q96HJ3 373 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 C18orf15Q96N68 181 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 PSMB7Q99436 277 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 MAP3K3Q99759 626 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 OVOL2Q9BRP0 275 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 THUMPD2Q9BTF0 503 aaKnown RBP2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 KIFC3Q9BVG8 833 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 TRPV4Q9HBA0 871 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 ASF1BQ9NVP2 202 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 TSPAN16Q9UKR8 245 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 PLAGL1Q9UM63 463 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 STYXL1Q9Y6J8 313 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 DDX49Q9Y6V7 483 aaKnown RBP2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 SSPOA2VEC9 5147 aa2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 SYNE2Q8WXH0 6885 aaKnown RBP2.18□□□□□ -2.06
HMGB1P18-201ENST00000438801 NFASCO94856 1347 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 KIAA1549LQ6ZVL6 1849 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 LRCH4O75427 683 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 SCGB1D1O95968 90 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 PIGRP01833 764 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 FCARP24071 287 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 CHMLP26374 656 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 MFAP4P55083 255 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 AIMP1Q12904 312 aaKnown RBP2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 CDH18Q13634 790 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 TAB1Q15750 504 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 HAUS3Q68CZ6 603 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 DHRS7BQ6IAN0 325 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 LCLAT1Q6UWP7 414 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 LEKR1Q6ZMV7 388 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 Q6ZVH6 145 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 CHMP1BQ7LBR1 199 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 ZER1Q7Z7L7 766 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 ADCK1Q86TW2 530 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 ZBED8Q8IZ13 594 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 KLHDC1Q8N7A1 406 aa2.17□□□□□ -2.06
HMGB1P18-201ENST00000438801 UCMAQ8WVF2 138 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms