RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 SELPLGQ14242 412 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 PYCR3Q53H96 274 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 HDDC2Q7Z4H3 204 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 BTLAQ7Z6A9 289 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 OR52N2Q8NGI0 321 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 OR56A3Q8NH54 315 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 WDR36Q8NI36 951 aaKnown RBP11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 TESCQ96BS2 214 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 MRPL48Q96GC5 212 aaKnown RBP11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 ALPK1Q96QP1 1244 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 IL4I1Q96RQ9 567 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 FAM129BQ96TA1 746 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 UCKL1Q9NWZ5 548 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 OR6C2Q9NZP2 312 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 TRPM7Q96QT4 1865 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 AREL1O15033 823 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 AGR2O95994 175 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 MYF6P23409 242 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 CAPZA2P47755 286 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 MLLT10P55197 1068 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 NPTX1Q15818 432 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 SLC36A3Q495N2 470 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 CDC73Q6P1J9 531 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 TBPL2Q6SJ96 375 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 IKBIPQ70UQ0 350 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 KRT74Q7RTS7 529 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 METTL27Q8N6F8 245 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 COQ10AQ96MF6 247 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 C19orf43Q9BQ61 176 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 MKRN2Q9H000 416 aaKnown RBP11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 TMEM168Q9H0V1 697 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 STMN3Q9NZ72 180 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 CCRL2O00421 344 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 KLK8O60259 260 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 SLC25A12O75746 678 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 RASAL1O95294 804 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 NPPBP16860 134 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 MAP2K4P45985 399 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 RGNQ15493 299 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 DEFB110Q30KQ9 67 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 TMEM107Q6UX40 140 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 FAM131AQ6UXB0 335 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 KLHDC8BQ8IXV7 354 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 AQP11Q8NBQ7 271 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 STON2Q8WXE9 905 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 PIGKQ92643 395 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 MMABQ96EY8 250 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 DGAT2Q96PD7 388 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 TGM7Q96PF1 710 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 AGPAT4Q9NRZ5 378 aa11.01□□□□□ -0.65
TRAPPC9-202ENST00000438773 TMEM221A6NGB7 291 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 CSF2P04141 144 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 RETP07949 1114 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 OPRD1P41143 372 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 OLR1P78380 273 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 TDGQ13569 410 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 RPE65Q16518 533 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 EEF1AKMT2Q5JPI9 291 aaKnown RBP11□□□□□ -0.65
TRAPPC9-202ENST00000438773 NCCRP1Q6ZVX7 275 aaPredicted RBP11□□□□□ -0.65
TRAPPC9-202ENST00000438773 IQCHQ86VS3 1027 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 HS3ST5Q8IZT8 346 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 NUP43Q8NFH3 380 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 CNIH3Q8TBE1 160 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 VMP1Q96GC9 406 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 NARS2Q96I59 477 aaKnown RBP11□□□□□ -0.65
TRAPPC9-202ENST00000438773 RPP25Q9BUL9 199 aaKnown RBP11□□□□□ -0.65
TRAPPC9-202ENST00000438773 WDR12Q9GZL7 423 aaKnown RBP11□□□□□ -0.65
TRAPPC9-202ENST00000438773 PNO1Q9NRX1 252 aaKnown RBP11□□□□□ -0.65
TRAPPC9-202ENST00000438773 SUSD2Q9UGT4 822 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 ZNF222Q9UK12 451 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 POFUT2Q9Y2G5 429 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 FAM86C2PA6NEL3 165 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 ACOX3O15254 700 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 MAOBP27338 520 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 ACSL1P33121 698 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 CLK3P49761 638 aaKnown RBP11□□□□□ -0.65
TRAPPC9-202ENST00000438773 HNRNPKP61978 463 aaKnown RBP eCLIP11□□□□□ -0.654e-6■□□□□ 8.7
TRAPPC9-202ENST00000438773 DPTQ07507 201 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 KRR1Q13601 381 aaKnown RBP11□□□□□ -0.65
TRAPPC9-202ENST00000438773 ZNF829Q3KNS6 432 aaPredicted RBP11□□□□□ -0.65
TRAPPC9-202ENST00000438773 EIPR1Q53HC9 387 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 PRSS36Q5K4E3 855 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 USP53Q70EK8 1073 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 SLC6A16Q9GZN6 736 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 KCNK12Q9HB15 430 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 BTNL2Q9UIR0 455 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 CCDC182A6NF36 153 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 GNB5O14775 395 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 CLEC3AO75596 197 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 FHP07954 510 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 F3P13726 295 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 HYAL1Q12794 435 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 RAB2BQ8WUD1 216 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 MRGPRX3Q96LB0 322 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 ZFYVE21Q9BQ24 234 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 NDC1Q9BTX1 674 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 OR51I1Q9H343 314 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 SNTG1Q9NSN8 517 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 TBCCD1Q9NVR7 557 aa11□□□□□ -0.65
TRAPPC9-202ENST00000438773 CXorf51AA0A1B0GTR3 108 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms