RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 ZNF263O14978 683 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 PGRMC2O15173 223 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 OGTO15294 1046 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 FMO6PO60774 539 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 GRAP2O75791 330 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 ALDH1B1P30837 517 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 OR3A1P47881 315 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 KCNJ1P48048 391 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 KHKP50053 298 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 AKAP17AQ02040 695 aaKnown RBP2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 DHODHQ02127 395 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 TRA2AQ13595 282 aaKnown RBP eCLIP2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 CCDC184Q52MB2 194 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 ARMCX4Q5H9R4 360 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 CCDC158Q5M9N0 1113 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 ATP1A1-AS1Q5TC04 95 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 AGAP6Q5VW22 663 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 C15orf52Q6ZUT6 534 aaKnown RBP2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 CCDC91Q7Z6B0 441 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 PIGWQ7Z7B1 504 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 CROCCP3Q8IVE0 287 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 KLHDC8AQ8IYD2 350 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 CCDC170Q8IYT3 715 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 ZNF444Q8N0Y2 327 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 C11orf42Q8N5U0 333 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 C10orf53Q8N6V4 93 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 CCDC185Q8N715 623 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 CASP10Q92851 521 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 PTP4A1Q93096 173 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 IL12RB2Q99665 862 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 PRMT1Q99873 361 aaKnown RBP2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 DESI2Q9BSY9 194 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 PI4K2AQ9BTU6 479 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 JPT2Q9H910 190 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 CNIH4Q9P003 139 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 HACD3Q9P035 362 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 ABCD2Q9UBJ2 740 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 PLCL2Q9UPR0 1127 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 RNF123Q5XPI4 1314 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 CPDO75976 1380 aa2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 DHX57Q6P158 1386 aaKnown RBP2.35□□□□□ -2.03
HMGB1P31-201ENST00000437242 BCL9O00512 1426 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 USP6P35125 1406 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 CPSF1Q10570 1443 aaKnown RBP2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 MON2Q7Z3U7 1717 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 IQCMA0A1B0GVH7 501 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 A8MVM7 634 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 FAM220BPB1ANY3 271 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 E5RGE8 158 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 G3V2L1 256 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 H0Y9J4 135 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 H3BMM5 538 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 SURF4O15260 269 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 TTI1O43156 1089 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 ATP9AO75110 1047 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 RTN2O75298 545 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 SAP30O75446 220 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 CLN5O75503 358 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 CRCPO75575 148 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 GLCEO94923 617 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 LY6G6DO95868 133 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 MGMTP16455 207 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 SOX3P41225 446 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 SLC3A1Q07837 685 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 TEFQ10587 303 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 TMEM132DQ14C87 1099 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 STXBP2Q15833 593 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 ZNF674Q2M3X9 581 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 FAM106AQ4KMX7 169 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 OR4C11Q6IEV9 310 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 DHRS11Q6UWP2 260 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 CCBE1Q6UXH8 406 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 TEX26Q8N6G2 289 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 RTL3Q8N8U3 475 aaKnown RBP2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 PSMA8Q8TAA3 256 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 CDKN2AIPNLQ96HQ2 116 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 IDI2Q9BXS1 227 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 TRIM7Q9C029 511 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 C5orf66Q9H5L9 145 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 RNPEPL1Q9HAU8 725 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 MRPL17Q9NRX2 175 aaKnown RBP2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 POLKQ9UBT6 870 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 GMEB2Q9UKD1 530 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 SATB2Q9UPW6 733 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 ITM2BQ9Y287 266 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 NSG2Q9Y328 171 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 HBS1LQ9Y450 684 aaKnown RBP2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 COLEC10Q9Y6Z7 277 aa2.34□□□□□ -2.03
HMGB1P31-201ENST00000437242 ACEP12821 1306 aa2.34□□□□□ -2.04
HMGB1P31-201ENST00000437242 ADAMTS7Q9UKP4 1686 aa2.34□□□□□ -2.04
HMGB1P31-201ENST00000437242 POLR3AO14802 1390 aaPredicted RBP2.34□□□□□ -2.04
HMGB1P31-201ENST00000437242 COL5A3P25940 1745 aaPredicted RBP2.34□□□□□ -2.04
HMGB1P31-201ENST00000437242 PPIP5K1Q6PFW1 1433 aa2.34□□□□□ -2.04
HMGB1P31-201ENST00000437242 SCN11AQ9UI33 1791 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 DLEC1Q9Y238 1755 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 AFDNP55196 1824 aaKnown RBP2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 MEGF6O75095 1541 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 A0A087WZ39 114 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 hCG_38984A0A1B0GV85 526 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms