RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 ZNF681Q96N22 645 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 ROGDIQ9GZN7 287 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 RAD21L1Q9H4I0 556 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 PRMT8Q9NR22 394 aaPredicted RBP19.91■□□□□ 0.78
PTPRF-207ENST00000436724 ZCCHC3Q9NUD5 404 aaKnown RBP19.91■□□□□ 0.78
PTPRF-207ENST00000436724 MYRFQ9Y2G1 1151 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 CEPT1Q9Y6K0 416 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 U3KQV3 271 aa19.91■□□□□ 0.78
PTPRF-207ENST00000436724 CCDC160A6NGH7 325 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 GNGT2O14610 69 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 ARAFP10398 606 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 CALRP27797 417 aaKnown RBP19.9■□□□□ 0.78
PTPRF-207ENST00000436724 MAGEA2P43356 314 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 RBBP4Q09028 425 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 SHBQ15464 509 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 LTB4RQ15722 352 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 PMS2CLQ68D20 193 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 TMEM107Q6UX40 140 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 MCATQ8IVS2 390 aaKnown RBP19.9■□□□□ 0.78
PTPRF-207ENST00000436724 SLC35F3Q8IY50 421 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 MAML2Q8IZL2 1156 aaPredicted RBP19.9■□□□□ 0.78
PTPRF-207ENST00000436724 OR5D16Q8NGK9 328 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 OR9A2Q8NGT5 310 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 ZNF639Q9UID6 485 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 IGHV5-51A0A0C4DH38 117 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 A0A1B0GVG6 124 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 M0QX08 132 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 LAMTOR5O43504 91 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 SEMG1P04279 462 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 CSNK2A2P19784 350 aaPredicted RBP19.9■□□□□ 0.78
PTPRF-207ENST00000436724 ALDH3B2P48448 385 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 CSTF1Q05048 431 aaKnown RBP19.9■□□□□ 0.78
PTPRF-207ENST00000436724 RPS26P11Q5JNZ5 115 aaPredicted RBP19.9■□□□□ 0.78
PTPRF-207ENST00000436724 C6orf132Q5T0Z8 1188 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 TMEM179BQ7Z7N9 219 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 TAMM41Q96BW9 452 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 ELF4Q99607 663 aaPredicted RBP19.9■□□□□ 0.78
PTPRF-207ENST00000436724 IL1RAPQ9NPH3 570 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 PHF11Q9UIL8 331 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 ZNF780BQ9Y6R6 833 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 NCOR1O75376 2440 aa19.9■□□□□ 0.78
PTPRF-207ENST00000436724 SGK494L7N484 410 aa19.89■□□□□ 0.77
PTPRF-207ENST00000436724 HMGN4O00479 90 aa19.89■□□□□ 0.77
PTPRF-207ENST00000436724 NME6O75414 186 aaPredicted RBP19.89■□□□□ 0.77
PTPRF-207ENST00000436724 GNAO1P09471 354 aa19.89■□□□□ 0.77
PTPRF-207ENST00000436724 TNFRSF1BP20333 461 aa19.89■□□□□ 0.77
PTPRF-207ENST00000436724 OR1D5P58170 312 aa19.89■□□□□ 0.77
PTPRF-207ENST00000436724 SIM2Q14190 667 aaPredicted RBP19.89■□□□□ 0.77
PTPRF-207ENST00000436724 ZNF630Q2M218 657 aaPredicted RBP19.89■□□□□ 0.77
PTPRF-207ENST00000436724 CYP27C1Q4G0S4 372 aa19.89■□□□□ 0.77
PTPRF-207ENST00000436724 TMEM52Q8NDY8 209 aa19.89■□□□□ 0.77
PTPRF-207ENST00000436724 SLC38A5Q8WUX1 472 aa19.89■□□□□ 0.77
PTPRF-207ENST00000436724 COL26A1Q96A83 441 aa19.89■□□□□ 0.77
PTPRF-207ENST00000436724 TMIGD2Q96BF3 282 aa19.89■□□□□ 0.77
PTPRF-207ENST00000436724 RMND5BQ96G75 393 aaPredicted RBP19.89■□□□□ 0.77
PTPRF-207ENST00000436724 YIPF4Q9BSR8 244 aa19.89■□□□□ 0.77
PTPRF-207ENST00000436724 VNN3Q9NY84 501 aa19.89■□□□□ 0.77
PTPRF-207ENST00000436724 SLC22A7Q9Y694 548 aa19.89■□□□□ 0.77
PTPRF-207ENST00000436724 SUV39H1O43463 412 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 GALR3O60755 368 aaPredicted RBP19.88■□□□□ 0.77
PTPRF-207ENST00000436724 BCHEP06276 602 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 ZNF10P21506 573 aaPredicted RBP19.88■□□□□ 0.77
PTPRF-207ENST00000436724 MPIP34949 423 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 SH3BGRP55822 239 aaPredicted RBP19.88■□□□□ 0.77
PTPRF-207ENST00000436724 ID2Q02363 134 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 CEBPEQ15744 281 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 STK32CQ86UX6 486 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 WDR5BQ86VZ2 330 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 DNAJC22Q8N4W6 341 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 ERVMER34-1Q9H9K5 563 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 GIMAP4Q9NUV9 329 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 ADPRHL2Q9NX46 363 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 FAM227AF5H4B4 570 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 MED26O95402 600 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 MC3RP41968 323 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 KCNJ10P78508 379 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 MANEAQ5SRI9 462 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 ANKRD34AQ69YU3 496 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 GATAD2AQ86YP4 633 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 ARHGEF39Q8N4T4 335 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 SMYD1Q8NB12 490 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 OR9A4Q8NGU2 314 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 KAT2AQ92830 837 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 EDAQ92838 391 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 PSME2Q9UL46 239 aa19.88■□□□□ 0.77
PTPRF-207ENST00000436724 FABP3P05413 133 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 OR12D1P0DN82 309 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 XKP51811 444 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 SELENOWP63302 87 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 SHC2P98077 582 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 MERTKQ12866 999 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 MAPK11Q15759 364 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 TBC1D20Q96BZ9 403 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 TCTN2Q96GX1 697 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 SLC35G5Q96KT7 338 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 DOHHQ9BU89 302 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 ADI1Q9BV57 179 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 OR51I1Q9H343 314 aa19.87■□□□□ 0.77
PTPRF-207ENST00000436724 CLK4Q9HAZ1 481 aaKnown RBP19.87■□□□□ 0.77
PTPRF-207ENST00000436724 SEMA3GQ9NS98 782 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms