RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 PRAMEF2O60811 474 aa19.48■□□□□ 0.71
GTF3A-203ENST00000435781 NEFHP12036 1026 aa19.48■□□□□ 0.71
GTF3A-203ENST00000435781 CPMP14384 443 aa19.48■□□□□ 0.71
GTF3A-203ENST00000435781 CD96P40200 585 aa19.48■□□□□ 0.71
GTF3A-203ENST00000435781 MAGOHP61326 146 aaKnown RBP19.48■□□□□ 0.71
GTF3A-203ENST00000435781 ZNF468Q5VIY5 522 aaPredicted RBP19.48■□□□□ 0.71
GTF3A-203ENST00000435781 Q6ZSR9 355 aa19.48■□□□□ 0.71
GTF3A-203ENST00000435781 ANKRD42Q8N9B4 389 aa19.48■□□□□ 0.71
GTF3A-203ENST00000435781 MDS2Q8NDY4 140 aa19.48■□□□□ 0.71
GTF3A-203ENST00000435781 OR2T11Q8NH01 316 aa19.48■□□□□ 0.71
GTF3A-203ENST00000435781 OR8K3Q8NH51 312 aa19.48■□□□□ 0.71
GTF3A-203ENST00000435781 FAM76AQ8TAV0 307 aa19.48■□□□□ 0.71
GTF3A-203ENST00000435781 TWIST2Q8WVJ9 160 aa19.48■□□□□ 0.71
GTF3A-203ENST00000435781 RIT1Q92963 219 aa19.48■□□□□ 0.71
GTF3A-203ENST00000435781 METTL2AQ96IZ6 378 aaKnown RBP19.48■□□□□ 0.71
GTF3A-203ENST00000435781 SIGLEC12Q96PQ1 595 aa19.48■□□□□ 0.71
GTF3A-203ENST00000435781 CNPPD1Q9BV87 410 aa19.48■□□□□ 0.71
GTF3A-203ENST00000435781 CXorf21Q9HAI6 301 aa19.48■□□□□ 0.71
GTF3A-203ENST00000435781 LRTM1Q9HBL6 345 aa19.48■□□□□ 0.71
GTF3A-203ENST00000435781 ZDHHC2Q9UIJ5 367 aa19.48■□□□□ 0.71
GTF3A-203ENST00000435781 NTNG1Q9Y2I2 539 aa19.48■□□□□ 0.71
GTF3A-203ENST00000435781 POLR3HQ9Y535 204 aaPredicted RBP19.48■□□□□ 0.71
GTF3A-203ENST00000435781 CDK2AP1O14519 115 aa19.47■□□□□ 0.71
GTF3A-203ENST00000435781 ITM2AO43736 263 aa19.47■□□□□ 0.71
GTF3A-203ENST00000435781 LYPLA1O75608 230 aaPredicted RBP19.47■□□□□ 0.71
GTF3A-203ENST00000435781 ERAL1O75616 437 aaKnown RBP19.47■□□□□ 0.71
GTF3A-203ENST00000435781 LINC00032P0C843 101 aa19.47■□□□□ 0.71
GTF3A-203ENST00000435781 DRD2P14416 443 aa19.47■□□□□ 0.71
GTF3A-203ENST00000435781 H2AFXP16104 143 aaPredicted RBP19.47■□□□□ 0.71
GTF3A-203ENST00000435781 PORP16435 677 aaPredicted RBP19.47■□□□□ 0.71
GTF3A-203ENST00000435781 GSTM5P46439 218 aa19.47■□□□□ 0.71
GTF3A-203ENST00000435781 ERVK-8P63133 956 aa19.47■□□□□ 0.71
GTF3A-203ENST00000435781 RNF4P78317 190 aa19.47■□□□□ 0.71
GTF3A-203ENST00000435781 OC90Q02509 493 aaPredicted RBP19.47■□□□□ 0.71
GTF3A-203ENST00000435781 ZNF763Q0D2J5 394 aa19.47■□□□□ 0.71
GTF3A-203ENST00000435781 ZNF267Q14586 743 aaPredicted RBP19.47■□□□□ 0.71
GTF3A-203ENST00000435781 KIAA0040Q15053 153 aa19.47■□□□□ 0.71
GTF3A-203ENST00000435781 NR6A1Q15406 480 aa19.47■□□□□ 0.71
GTF3A-203ENST00000435781 OR1C1Q15619 314 aa19.47■□□□□ 0.71
GTF3A-203ENST00000435781 NOXRED1Q6NXP6 359 aa19.47■□□□□ 0.71
GTF3A-203ENST00000435781 RPUSD3Q6P087 351 aaKnown RBP19.47■□□□□ 0.71
GTF3A-203ENST00000435781 C16orf47Q6ZP98 133 aaPredicted RBP19.47■□□□□ 0.71
GTF3A-203ENST00000435781 DDIASQ8IXT1 998 aa19.47■□□□□ 0.71
GTF3A-203ENST00000435781 SUN3Q8TAQ9 357 aa19.47■□□□□ 0.71
GTF3A-203ENST00000435781 KLHL29Q96CT2 875 aa19.47■□□□□ 0.71
GTF3A-203ENST00000435781 C19orf60Q96EN9 201 aa19.47■□□□□ 0.71
GTF3A-203ENST00000435781 LIN28AQ9H9Z2 209 aaKnown RBP19.47■□□□□ 0.71
GTF3A-203ENST00000435781 ASF1BQ9NVP2 202 aa19.47■□□□□ 0.71
GTF3A-203ENST00000435781 ARGLU1Q9NWB6 273 aaPredicted RBP19.47■□□□□ 0.71
GTF3A-203ENST00000435781 C1orf109Q9NX04 203 aa19.47■□□□□ 0.71
GTF3A-203ENST00000435781 MAP10Q9P2G4 905 aa19.47■□□□□ 0.71
GTF3A-203ENST00000435781 PSME2Q9UL46 239 aa19.47■□□□□ 0.71
GTF3A-203ENST00000435781 ERVK-19Q9WJR5 959 aa19.47■□□□□ 0.71
GTF3A-203ENST00000435781 EXPH5Q8NEV8 1989 aa19.46■□□□□ 0.71
GTF3A-203ENST00000435781 TMEM114B3SHH9 223 aa19.46■□□□□ 0.71
GTF3A-203ENST00000435781 PIP5K1BO14986 540 aa19.46■□□□□ 0.71
GTF3A-203ENST00000435781 SEC22BO75396 215 aa19.46■□□□□ 0.71
GTF3A-203ENST00000435781 ITGA10O75578 1167 aa19.46■□□□□ 0.71
GTF3A-203ENST00000435781 HSPA4LO95757 839 aa19.46■□□□□ 0.71
GTF3A-203ENST00000435781 BGNP21810 368 aa19.46■□□□□ 0.71
GTF3A-203ENST00000435781 TRHRP34981 398 aaPredicted RBP19.46■□□□□ 0.71
GTF3A-203ENST00000435781 FEN1P39748 380 aaKnown RBP19.46■□□□□ 0.71
GTF3A-203ENST00000435781 HK2P52789 917 aa19.46■□□□□ 0.71
GTF3A-203ENST00000435781 WDR4P57081 412 aaKnown RBP19.46■□□□□ 0.71
GTF3A-203ENST00000435781 HEPACAMQ14CZ8 416 aa19.46■□□□□ 0.71
GTF3A-203ENST00000435781 ZNF766Q5HY98 468 aa19.46■□□□□ 0.71
GTF3A-203ENST00000435781 HHATQ5VTY9 493 aa19.46■□□□□ 0.71
GTF3A-203ENST00000435781 GALNT12Q8IXK2 581 aa19.46■□□□□ 0.71
GTF3A-203ENST00000435781 CDC26Q8NHZ8 85 aa19.46■□□□□ 0.71
GTF3A-203ENST00000435781 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.46■□□□□ 0.71
GTF3A-203ENST00000435781 CNRIP1Q96F85 164 aaPredicted RBP19.46■□□□□ 0.71
GTF3A-203ENST00000435781 PAIP2Q9BPZ3 127 aaKnown RBP19.46■□□□□ 0.71
GTF3A-203ENST00000435781 ZNF395Q9H8N7 513 aaPredicted RBP19.46■□□□□ 0.71
GTF3A-203ENST00000435781 TRIM45Q9H8W5 580 aaPredicted RBP19.46■□□□□ 0.71
GTF3A-203ENST00000435781 LRFN1Q9P244 771 aa19.46■□□□□ 0.71
GTF3A-203ENST00000435781 MYOTQ9UBF9 498 aa19.46■□□□□ 0.71
GTF3A-203ENST00000435781 UTS2RQ9UKP6 389 aa19.46■□□□□ 0.71
GTF3A-203ENST00000435781 YARS2Q9Y2Z4 477 aaKnown RBP19.46■□□□□ 0.71
GTF3A-203ENST00000435781 COPG1Q9Y678 874 aaKnown RBP19.46■□□□□ 0.71
GTF3A-203ENST00000435781 HIVEP3Q5T1R4 2406 aa19.46■□□□□ 0.71
GTF3A-203ENST00000435781 OR2J2O76002 312 aa19.45■□□□□ 0.7
GTF3A-203ENST00000435781 NEURL1O76050 574 aa19.45■□□□□ 0.7
GTF3A-203ENST00000435781 WISP1O95388 367 aa19.45■□□□□ 0.7
GTF3A-203ENST00000435781 CT62P0C5K7 136 aa19.45■□□□□ 0.7
GTF3A-203ENST00000435781 CSNK2A2P19784 350 aaPredicted RBP19.45■□□□□ 0.7
GTF3A-203ENST00000435781 NT5EP21589 574 aa19.45■□□□□ 0.7
GTF3A-203ENST00000435781 GRK2P25098 689 aa19.45■□□□□ 0.7
GTF3A-203ENST00000435781 CYB561P49447 251 aa19.45■□□□□ 0.7
GTF3A-203ENST00000435781 HLCSP50747 726 aa19.45■□□□□ 0.7
GTF3A-203ENST00000435781 SLC18A1P54219 525 aa19.45■□□□□ 0.7
GTF3A-203ENST00000435781 ABCE1P61221 599 aaKnown RBP19.45■□□□□ 0.7
GTF3A-203ENST00000435781 DUSP2Q05923 314 aa19.45■□□□□ 0.7
GTF3A-203ENST00000435781 AGBL2Q5U5Z8 902 aa19.45■□□□□ 0.7
GTF3A-203ENST00000435781 SPINK14Q6IE38 97 aa19.45■□□□□ 0.7
GTF3A-203ENST00000435781 FAM180BQ6P0A1 224 aa19.45■□□□□ 0.7
GTF3A-203ENST00000435781 C9orf40Q8IXQ3 194 aa19.45■□□□□ 0.7
GTF3A-203ENST00000435781 OR5L2Q8NGL0 311 aa19.45■□□□□ 0.7
GTF3A-203ENST00000435781 ARL8AQ96BM9 186 aa19.45■□□□□ 0.7
GTF3A-203ENST00000435781 FCRL1Q96LA6 429 aa19.45■□□□□ 0.7
GTF3A-203ENST00000435781 ZNF681Q96N22 645 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms