RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 IQGAP1P46940 1657 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 C9JVG2 144 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 DNAJB1P25685 340 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 SUSD1Q6UWL2 747 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 CCDC116Q8IYX3 515 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 OR10T2Q8NGX3 314 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 SLC2A12Q8TD20 617 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 ITPAQ9BY32 194 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 YTHDF1Q9BYJ9 559 aaKnown RBP10.74□□□□□ -0.69
SCN4A-201ENST00000435607 PCTPQ9UKL6 214 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 FUOMA2VDF0 154 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 SLC16A5O15375 505 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 LUMP51884 338 aaPredicted RBP10.74□□□□□ -0.69
SCN4A-201ENST00000435607 NKX3-2P78367 333 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 ADAM17P78536 824 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 PDE7AQ13946 482 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 ZNF808Q8N4W9 903 aaPredicted RBP10.74□□□□□ -0.69
SCN4A-201ENST00000435607 NLGN4YQ8NFZ3 816 aaPredicted RBP10.74□□□□□ -0.69
SCN4A-201ENST00000435607 GATA5Q9BWX5 397 aaPredicted RBP10.74□□□□□ -0.69
SCN4A-201ENST00000435607 OR51B5Q9H339 312 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 RANBP3Q9H6Z4 567 aaPredicted RBP10.74□□□□□ -0.69
SCN4A-201ENST00000435607 SRA1Q9HD15 236 aaKnown RBP10.74□□□□□ -0.69
SCN4A-201ENST00000435607 H7BY64 318 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 TGFB1I1O43294 461 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 SSX4O60224 188 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 C6P13671 934 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 EEF1A1P5Q5VTE0 462 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 OR52E8Q6IFG1 317 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 ARHGAP11AQ6P4F7 1023 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 RDH10Q8IZV5 341 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 ESAMQ96AP7 390 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 PRAP1Q96NZ9 151 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 TUBA1CQ9BQE3 449 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 CD244Q9BZW8 370 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 ENKD1Q9H0I2 346 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 SLC6A14Q9UN76 642 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 SOWAHBA6NEL2 793 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 LIN37Q96GY3 246 aaPredicted RBP10.73□□□□□ -0.69
SCN4A-201ENST00000435607 UNC119BA6NIH7 251 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 C9IYK1 514 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 C6orf47O95873 294 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 ICAM2P13598 275 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 TM4SF1P30408 202 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 GJA9P57773 515 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 DRICH1Q6PGQ1 229 aaPredicted RBP10.73□□□□□ -0.69
SCN4A-201ENST00000435607 RNF130Q86XS8 419 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 GLIS3Q8NEA6 775 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 SGTBQ96EQ0 304 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 SSX3Q99909 188 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 COL20A1Q9P218 1284 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 CMAHPQ9Y471 501 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 PIAS3Q9Y6X2 628 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 MANBAO00462 879 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 PRAMEF2O60811 474 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 ZNF780AO75290 641 aaPredicted RBP10.73□□□□□ -0.69
SCN4A-201ENST00000435607 YES1P07947 543 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 MTHFD2P13995 350 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 MAGEA11P43364 429 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 SLC11A1P49279 550 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 GOLGA7Q7Z5G4 137 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 GALNT15Q8N3T1 639 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 SLC35F5Q8WV83 523 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 CGREF1Q99674 301 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 DTLQ9NZJ0 730 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 LOC730098B7Z3J9 87 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 MAGEA8P43361 318 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 CSNK2A1P68400 391 aaPredicted RBP10.73□□□□□ -0.69
SCN4A-201ENST00000435607 ABHD18Q0P651 414 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 CCL14Q16627 93 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 LRIT3Q3SXY7 679 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 STON2Q8WXE9 905 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 DERL2Q9GZP9 239 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 ZBTB20Q9HC78 741 aaPredicted RBP10.73□□□□□ -0.69
SCN4A-201ENST00000435607 TMEM225BP0DP42 221 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 MOGQ16653 247 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 DAZAP1Q96EP5 407 aaKnown RBP10.73□□□□□ -0.69
SCN4A-201ENST00000435607 FAM117AQ9C073 453 aa10.73□□□□□ -0.69
SCN4A-201ENST00000435607 BOKQ9UMX3 212 aaPredicted RBP10.73□□□□□ -0.69
SCN4A-201ENST00000435607 ZNF860A6NHJ4 632 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 PORP16435 677 aaPredicted RBP10.72□□□□□ -0.69
SCN4A-201ENST00000435607 OGDHQ02218 1023 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 ZNF33AQ06730 810 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 PTCHD3Q3KNS1 767 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 SH3PXD2AQ5TCZ1 1133 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 TXNDC5Q8NBS9 432 aaKnown RBP10.72□□□□□ -0.69
SCN4A-201ENST00000435607 RSC1A1Q92681 617 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 TAAR8Q969N4 342 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 NANOGQ9H9S0 305 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 TPT1P8Q9HAU6 139 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 HS3ST4Q9Y661 456 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 GLOD5A6NK44 160 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 FOXE1O00358 373 aaPredicted RBP10.72□□□□□ -0.69
SCN4A-201ENST00000435607 SHOX2O60902 331 aaPredicted RBP10.72□□□□□ -0.69
SCN4A-201ENST00000435607 DNAJB6O75190 326 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 ATP6V1G1O75348 118 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 OPN1SWP03999 348 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 CD53P19397 219 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 DBPQ10586 325 aaPredicted RBP10.72□□□□□ -0.69
SCN4A-201ENST00000435607 MFSD5Q6N075 450 aa10.72□□□□□ -0.69
SCN4A-201ENST00000435607 NIPAL3Q6P499 406 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms