RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 CD79BP40259 229 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 ATXN7L2Q5T6C5 722 aaPredicted RBP7.11□□□□□ -1.27
CPSF6-202ENST00000435070 SBSNQ6UWP8 590 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 BHLHA9Q7RTU4 235 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 RNF180Q86T96 592 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 MDGA1Q8NFP4 955 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 CREB3L1Q96BA8 519 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 THAP7Q9BT49 309 aaPredicted RBP7.11□□□□□ -1.27
CPSF6-202ENST00000435070 ARHGAP39Q9C0H5 1083 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 SLC6A15Q9H2J7 730 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 NMNAT1Q9HAN9 279 aaPredicted RBP7.11□□□□□ -1.27
CPSF6-202ENST00000435070 PRAMEF25A6NGN4 478 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 LINC00587B1AMM8 73 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 F8W810 466 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 PRMT3O60678 531 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 FGF1P05230 155 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 CELP19835 753 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 WARSP23381 471 aaKnown RBP7.11□□□□□ -1.27
CPSF6-202ENST00000435070 LCN1P31025 176 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 TOMM20Q15388 145 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 IFI44LQ53G44 452 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 TMEM88Q6PEY1 159 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 NLRC3Q7RTR2 1065 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 LSM2Q9Y333 95 aaKnown RBP7.11□□□□□ -1.27
CPSF6-202ENST00000435070 PRSS44E7EML9 344 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 CKBP12277 381 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 ELK1P19419 428 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 ERVK-25P63136 954 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 C3P1Q6ZMU1 363 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 CFAP52Q8N1V2 620 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 NANOGP1Q8N7R0 232 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 OR5AK3PQ8NH89 298 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 PGAP3Q96FM1 320 aaPredicted RBP7.11□□□□□ -1.27
CPSF6-202ENST00000435070 POLR1EQ9GZS1 481 aaKnown RBP7.11□□□□□ -1.27
CPSF6-202ENST00000435070 CTPS2Q9NRF8 586 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 TMEM45AQ9NWC5 275 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 PFDN2Q9UHV9 154 aa7.11□□□□□ -1.27
CPSF6-202ENST00000435070 SEC14L5O43304 696 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 ONECUT3O60422 494 aaPredicted RBP7.1□□□□□ -1.27
CPSF6-202ENST00000435070 LGALS2P05162 132 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 NR2F6P10588 404 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 PEPDP12955 493 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 ADAM15Q13444 863 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 HIST2H2AA3Q6FI13 130 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 AFTPHQ6ULP2 937 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 ZNF852Q6ZMS4 543 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 SAMD7Q7Z3H4 446 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 TMPRSS9Q7Z410 1059 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 DEFB128Q7Z7B8 93 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 ARRDC4Q8NCT1 418 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 ZC3HAV1LQ96H79 300 aaKnown RBP7.1□□□□□ -1.27
CPSF6-202ENST00000435070 RPRD1AQ96P16 312 aaPredicted RBP7.1□□□□□ -1.27
CPSF6-202ENST00000435070 ERMAPQ96PL5 475 aaPredicted RBP7.1□□□□□ -1.27
CPSF6-202ENST00000435070 MTERF1Q99551 399 aaKnown RBP7.1□□□□□ -1.27
CPSF6-202ENST00000435070 HTATIP2Q9BUP3 242 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 CACNG6Q9BXT2 260 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 MCOLN1Q9GZU1 580 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 SRRDQ9UH36 339 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 SHISA3A0PJX4 238 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 INPPL1O15357 1258 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 HRO43593 1189 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 FZD6O60353 706 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 TBX18O95935 607 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 IFNA14P01570 189 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 PCBP2Q15366 365 aaKnown RBP eCLIP7.1□□□□□ -1.272e-15■□□□□ 9.5
CPSF6-202ENST00000435070 COX20Q5RI15 118 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 FAM180BQ6P0A1 224 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 OR4K1Q8NGD4 311 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 NFKBIDQ8NI38 313 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 NEIL3Q8TAT5 605 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 HMGB4Q8WW32 186 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 FAM124BQ9H5Z6 455 aaPredicted RBP7.1□□□□□ -1.27
CPSF6-202ENST00000435070 EDARQ9UNE0 448 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 A0A1B0GVM2 712 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 GPR171O14626 319 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 SEMG1P04279 462 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 OR56A5P0C7T3 313 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 AP1S1P61966 158 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 MLLT11Q13015 90 aaPredicted RBP7.1□□□□□ -1.27
CPSF6-202ENST00000435070 ST3GAL2Q16842 350 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 CXorf57Q6NSI4 855 aaKnown RBP7.1□□□□□ -1.27
CPSF6-202ENST00000435070 TMEM107Q6UX40 140 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 C11orf65Q8NCR3 313 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 SLC6A18Q96N87 628 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 BOCQ9BWV1 1114 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 LDAHQ9H6V9 325 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 EMC7Q9NPA0 242 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 ERVK-19Q9WJR5 959 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 GPR52Q9Y2T5 361 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 MAP4K5Q9Y4K4 846 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 PRRC2BQ5JSZ5 2229 aaKnown RBP7.1□□□□□ -1.27
CPSF6-202ENST00000435070 NUMA1Q14980 2115 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 C2orf81A6NN90 581 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 L7N2F9 121 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 SEPT4O43236 478 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 ATG12O94817 140 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 HOXB3P14651 431 aaPredicted RBP7.1□□□□□ -1.27
CPSF6-202ENST00000435070 GPX2P18283 190 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 SLC6A1P30531 599 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 GUCA1AP43080 201 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms