RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 CDC20Q12834 499 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 SFSWAPQ12872 951 aaKnown RBP9.87□□□□□ -0.83
CD44-210ENST00000434472 GPM6BQ13491 265 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 KRR1Q13601 381 aaKnown RBP9.87□□□□□ -0.83
CD44-210ENST00000434472 SLC9A5Q14940 896 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 MAPK11Q15759 364 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 AGBL4Q5VU57 503 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 AGAP7PQ5VUJ5 663 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 TCTN3Q6NUS6 607 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 C19orf48Q6RUI8 117 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 CD300LDQ6UXZ3 194 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 DEF8Q6ZN54 512 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 GDPGP1Q6ZNW5 385 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 BTLAQ7Z6A9 289 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 EGFL6Q8IUX8 553 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 ZBTB8BQ8NAP8 495 aaPredicted RBP9.87□□□□□ -0.83
CD44-210ENST00000434472 OR56A1Q8NGH5 318 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 OR8J1Q8NGP2 316 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 WDR36Q8NI36 951 aaKnown RBP9.87□□□□□ -0.83
CD44-210ENST00000434472 RAB8BQ92930 207 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 TMEM80Q96HE8 168 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 AMDHD1Q96NU7 426 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 MGLLQ99685 303 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 NEURL2Q9BR09 285 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 LGR4Q9BXB1 951 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 C1QTNF7Q9BXJ2 289 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 POLR2J3Q9H1A7 115 aaKnown RBP9.87□□□□□ -0.83
CD44-210ENST00000434472 SIAEQ9HAT2 523 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 ZBTB20Q9HC78 741 aaPredicted RBP9.87□□□□□ -0.83
CD44-210ENST00000434472 MRPS30Q9NP92 439 aaKnown RBP9.87□□□□□ -0.83
CD44-210ENST00000434472 TM7SF3Q9NS93 570 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 TRNAU1APQ9NX07 287 aaKnown RBP9.87□□□□□ -0.83
CD44-210ENST00000434472 TEX10Q9NXF1 929 aaPredicted RBP9.87□□□□□ -0.83
CD44-210ENST00000434472 CRNNQ9UBG3 495 aaPredicted RBP9.87□□□□□ -0.83
CD44-210ENST00000434472 TRPC4Q9UBN4 977 aa9.87□□□□□ -0.83
CD44-210ENST00000434472 A0A0G2JPF8 293 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 A0A1W2PRQ8 180 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 IRGMA1A4Y4 181 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 HNRNPCL2B2RXH8 293 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 HNRNPCL3B7ZW38 293 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 BOLA2-SMG1P6H3BVE0 249 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 CASC3O15234 703 aaKnown RBP9.86□□□□□ -0.83
CD44-210ENST00000434472 MID1O15344 667 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 LCMT2O60294 686 aaKnown RBP9.86□□□□□ -0.83
CD44-210ENST00000434472 B4GALT2O60909 372 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 UPK1BO75841 260 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 MED26O95402 600 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 SERPIND1P05546 499 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 HNRNPCL4P0DMR1 293 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 OR12D1P0DN82 309 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 ACP5P13686 325 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 GSTM3P21266 225 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 GJA4P35212 333 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 LIMK1P53667 647 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 TAS2R38P59533 333 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 RPS3AP61247 264 aaKnown RBP9.86□□□□□ -0.83
CD44-210ENST00000434472 SGCGQ13326 291 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 IRF4Q15306 451 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 TPRG1LQ5T0D9 272 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 NDUFAF5Q5TEU4 345 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 KIAA1211LQ6NV74 962 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 PGBD2Q6P3X8 592 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 HDDC3Q8N4P3 179 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 LINC01555Q8NAE3 123 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 TP53I13Q8NBR0 393 aaPredicted RBP9.86□□□□□ -0.83
CD44-210ENST00000434472 OR2A1Q8NGT9 310 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 VANGL1Q8TAA9 524 aaPredicted RBP9.86□□□□□ -0.83
CD44-210ENST00000434472 XAGE5Q8WWM1 108 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 FUZQ9BT04 418 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 FNDC11Q9BVV2 318 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 ABCG4Q9H172 646 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 OR51E2Q9H255 320 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 GLIPR2Q9H4G4 154 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 TRIM45Q9H8W5 580 aaPredicted RBP9.86□□□□□ -0.83
CD44-210ENST00000434472 CPNE5Q9HCH3 593 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 MBNL1Q9NR56 388 aaKnown RBP9.86□□□□□ -0.83
CD44-210ENST00000434472 ZCCHC3Q9NUD5 404 aaKnown RBP9.86□□□□□ -0.83
CD44-210ENST00000434472 GIMAP4Q9NUV9 329 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 DZANK1Q9NVP4 752 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 CFL2Q9Y281 166 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 HEBP2Q9Y5Z4 205 aa9.86□□□□□ -0.83
CD44-210ENST00000434472 TCF20Q9UGU0 1960 aaKnown RBP9.86□□□□□ -0.83
CD44-210ENST00000434472 A0A075B6Q4 140 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 LOC100506127A0A0U1RQW1 187 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 LRIT2A6NDA9 550 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 LOC110117498-PIK3R3F6TDL0 507 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 H3BN98 237 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 MAN2B1O00754 1011 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 DSCR3O14972 297 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 ENTPD6O75354 484 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 NME6O75414 186 aaPredicted RBP9.85□□□□□ -0.83
CD44-210ENST00000434472 SCG5P05408 212 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 HSMCR30P0CW71 290 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 FCARP24071 287 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 CMPK1P30085 196 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 TGFBR1P36897 503 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 IFNGR2P38484 337 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 NCBP2P52298 156 aaKnown RBP eCLIP9.85□□□□□ -0.83
CD44-210ENST00000434472 RPS21P63220 83 aaKnown RBP9.85□□□□□ -0.83
CD44-210ENST00000434472 IFITM3Q01628 133 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms