RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 CCDC114Q96M63 670 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 HSD17B14Q9BPX1 270 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 SLC39A8Q9C0K1 460 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 MMADHCQ9H3L0 296 aaPredicted RBP2.48□□□□□ -2.01
CLK1-204ENST00000432425 THAP9Q9H5L6 903 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 VIPAS39Q9H9C1 493 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 S100A14Q9HCY8 104 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 FETUBQ9UGM5 382 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 MOSPD1Q9UJG1 213 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 PTBP2Q9UKA9 531 aaKnown RBP2.48□□□□□ -2.01
CLK1-204ENST00000432425 HBS1LQ9Y450 684 aaKnown RBP2.48□□□□□ -2.01
CLK1-204ENST00000432425 UMODL1Q5DID0 1318 aa2.48□□□□□ -2.01
CLK1-204ENST00000432425 ARHGEF37A1IGU5 675 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 VEGFDO43915 354 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 NEMFO60524 1076 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 BCAS2O75934 225 aaPredicted RBP2.47□□□□□ -2.01
CLK1-204ENST00000432425 KBTBD11O94819 623 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 FAM58BPP0C7Q3 252 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 ZNF853P0CG23 659 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 PDHBP11177 359 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 FERP16591 822 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 BEX3Q00994 111 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 CEACAM7Q14002 265 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 PPP1R7Q15435 360 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 IMMTQ16891 758 aaKnown RBP2.47□□□□□ -2.01
CLK1-204ENST00000432425 SLC22A6Q4U2R8 563 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 SLC39A12Q504Y0 691 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 CEP55Q53EZ4 464 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 PLPP4Q5VZY2 271 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 AP1ARQ63HQ0 302 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 REP15Q6BDI9 236 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 NEPROQ6NW34 567 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 KRTAP11-1Q8IUC1 163 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 CNTN4Q8IWV2 1026 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 MYOCDQ8IZQ8 938 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 SMYD1Q8NB12 490 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 BEST4Q8NFU0 473 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 OR52K2Q8NGK3 314 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 OR6T1Q8NGN1 323 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 FBXO30Q8TB52 745 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 SETD6Q8TBK2 473 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 RNF139Q8WU17 664 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 CTNNBL1Q8WYA6 563 aaPredicted RBP2.47□□□□□ -2.01
CLK1-204ENST00000432425 CFAP36Q96G28 342 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 ZNF274Q96GC6 653 aaPredicted RBP2.47□□□□□ -2.01
CLK1-204ENST00000432425 VPS39Q96JC1 886 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 C16orf45Q96MC5 204 aaPredicted RBP2.47□□□□□ -2.01
CLK1-204ENST00000432425 PRMT1Q99873 361 aaKnown RBP2.47□□□□□ -2.01
CLK1-204ENST00000432425 THUMPD3Q9BV44 507 aaKnown RBP2.47□□□□□ -2.01
CLK1-204ENST00000432425 NACA2Q9H009 215 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 COPS7BQ9H9Q2 264 aaPredicted RBP2.47□□□□□ -2.01
CLK1-204ENST00000432425 MID1IP1Q9NPA3 183 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 HOMER3Q9NSC5 361 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 NOSIPQ9Y314 301 aaKnown RBP2.47□□□□□ -2.01
CLK1-204ENST00000432425 TRAV34A0A0B4J273 112 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 CCDC162PA2VCL2 907 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 FOXI3A8MTJ6 420 aaPredicted RBP2.47□□□□□ -2.01
CLK1-204ENST00000432425 PRPSAP2O60256 369 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 ACSL4O60488 711 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 ZNF253O75346 499 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 CCDC172P0C7W6 258 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 UMPSP11172 480 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 CD9P21926 228 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 PPP2R1AP30153 589 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 DRD3P35462 400 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 TCF7P36402 384 aaPredicted RBP2.47□□□□□ -2.01
CLK1-204ENST00000432425 PRKCIP41743 596 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 MAGEA8P43361 318 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 OR3A1P47881 315 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 NPBWR1P48145 328 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 NAAAQ02083 359 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 YWHAHQ04917 246 aaPredicted RBP2.47□□□□□ -2.01
CLK1-204ENST00000432425 TWISTNBQ3B726 338 aaPredicted RBP2.47□□□□□ -2.01
CLK1-204ENST00000432425 UTF1Q5T230 341 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 LIPJQ5W064 366 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 OLFM4Q6UX06 510 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 GBP6Q6ZN66 633 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 RUFY3Q7L099 469 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 ANKRD46Q86W74 232 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 UNC45BQ8IWX7 931 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 TDHQ8IZJ6 230 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 CLEC1AQ8NC01 280 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 RNF149Q8NC42 400 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 CCDC148Q8NFR7 591 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 OR6C4Q8NGE1 309 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 C8orf46Q8TAG6 207 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.47□□□□□ -2.016e-7■■■■■ 27.3
CLK1-204ENST00000432425 CORO2AQ92828 525 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 BADQ92934 168 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 PRAM1Q96QH2 718 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 CCM2Q9BSQ5 444 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 YTHDF1Q9BYJ9 559 aaKnown RBP2.47□□□□□ -2.01
CLK1-204ENST00000432425 TNMDQ9H2S6 317 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 VCPKMTQ9H867 229 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 MINDY3Q9H8M7 445 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 HPS4Q9NQG7 708 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 MED17Q9NVC6 651 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 ANAPC11Q9NYG5 84 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 SEPT10Q9P0V9 454 aa2.47□□□□□ -2.01
CLK1-204ENST00000432425 DHRS4-AS1Q9P1J3 65 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms