RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 FAM109AQ8N4B1 249 aa8.69□□□□□ -1.02
CDC42-IT1-201ENST00000431803 RNF175Q8N4F7 328 aa8.69□□□□□ -1.02
CDC42-IT1-201ENST00000431803 TMEM251Q8N6I4 163 aa8.69□□□□□ -1.02
CDC42-IT1-201ENST00000431803 TEX9Q8N6V9 391 aa8.69□□□□□ -1.02
CDC42-IT1-201ENST00000431803 KCTD4Q8WVF5 259 aa8.69□□□□□ -1.02
CDC42-IT1-201ENST00000431803 TANKQ92844 425 aa8.69□□□□□ -1.02
CDC42-IT1-201ENST00000431803 RGMAQ96B86 450 aa8.69□□□□□ -1.02
CDC42-IT1-201ENST00000431803 NXNL1Q96CM4 212 aa8.69□□□□□ -1.02
CDC42-IT1-201ENST00000431803 DGAT2Q96PD7 388 aa8.69□□□□□ -1.02
CDC42-IT1-201ENST00000431803 RAB17Q9H0T7 212 aa8.69□□□□□ -1.02
CDC42-IT1-201ENST00000431803 RPF2Q9H7B2 306 aaKnown RBP8.69□□□□□ -1.02
CDC42-IT1-201ENST00000431803 IL1RL2Q9HB29 575 aa8.69□□□□□ -1.02
CDC42-IT1-201ENST00000431803 MCCC2Q9HCC0 563 aa8.69□□□□□ -1.02
CDC42-IT1-201ENST00000431803 BRD7Q9NPI1 651 aa8.69□□□□□ -1.02
CDC42-IT1-201ENST00000431803 PNPLA3Q9NST1 481 aa8.69□□□□□ -1.02
CDC42-IT1-201ENST00000431803 SACM1LQ9NTJ5 587 aa8.69□□□□□ -1.02
CDC42-IT1-201ENST00000431803 PHF11Q9UIL8 331 aa8.69□□□□□ -1.02
CDC42-IT1-201ENST00000431803 RNF6Q9Y252 685 aa8.69□□□□□ -1.02
CDC42-IT1-201ENST00000431803 ACOT9Q9Y305 439 aa8.69□□□□□ -1.02
CDC42-IT1-201ENST00000431803 ATG4BQ9Y4P1 393 aa8.69□□□□□ -1.02
CDC42-IT1-201ENST00000431803 LIPGQ9Y5X9 500 aa8.69□□□□□ -1.02
CDC42-IT1-201ENST00000431803 PHF3Q92576 2039 aaKnown RBP8.69□□□□□ -1.02
CDC42-IT1-201ENST00000431803 ZFHX3Q15911 3703 aa8.69□□□□□ -1.02
CDC42-IT1-201ENST00000431803 HRNRQ86YZ3 2850 aaPredicted RBP8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 HCFC1P51610 2035 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 A0A087X1B8 175 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 A0A0A6YYD5 115 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 NPIPA2E9PIF3 369 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 NPIPA3F8WFD2 350 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 H0YIV9 168 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 AQP7O14520 342 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 BCKDKO14874 412 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 PROM1O43490 865 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 SUSD5O60279 629 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 UGDHO60701 494 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 PRKRAO75569 313 aaKnown RBP8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 TOXO94900 526 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 NADKO95544 446 aaPredicted RBP8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 C2P06681 752 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 CELA3AP09093 270 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 HOXB4P17483 251 aaPredicted RBP8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 CAPN3P20807 821 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 ACVR2AP27037 513 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 DNASE1L1P49184 302 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 RAP1GDS1P52306 607 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 ALDH18A1P54886 795 aaKnown RBP8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 HNRNPH2P55795 449 aaKnown RBP8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 NUP107P57740 925 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 FOLH1Q04609 750 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 TLE4Q04727 773 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 ASPHQ12797 758 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 BIKQ13323 160 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 DDX39BQ13838 428 aaKnown RBP8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 PCBP2Q15366 365 aaKnown RBP eCLIP8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 TESK1Q15569 626 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 PFKFB4Q16877 469 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 FAM83EQ2M2I3 478 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 SPRED3Q2MJR0 410 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 GXYLT1Q4G148 440 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 LIPJQ5W064 366 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 C18orf63Q68DL7 685 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 MRM1Q6IN84 353 aaKnown RBP8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 FAM47EQ6ZV65 393 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 ACAD11Q709F0 780 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 TRILQ7L0X0 811 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 SYT9Q86SS6 491 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 OR4N5Q8IXE1 308 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 ST13P4Q8IZP2 240 aaPredicted RBP8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 SLC15A4Q8N697 577 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 PAQR8Q8TEZ7 354 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 CHTF18Q8WVB6 975 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 RND1Q92730 232 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 SPACA9Q96E40 222 aaPredicted RBP8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 RBM18Q96H35 190 aaKnown RBP8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 ART5Q96L15 291 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 GPR78Q96P69 363 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 SMC6Q96SB8 1091 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 MTERF1Q99551 399 aaKnown RBP8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 CENPKQ9BS16 269 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 ZNF703Q9H7S9 590 aaPredicted RBP8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 ACTR8Q9H981 624 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 SNX15Q9NRS6 342 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 ZDHHC18Q9NUE0 388 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 TUBA8Q9NY65 449 aaPredicted RBP8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 ASB4Q9Y574 426 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 FAM215AQ9Y5M1 114 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 INTS1Q8N201 2190 aaKnown RBP8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 C2CD3Q4AC94 2353 aa8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 ANKHD1Q8IWZ3 2542 aaKnown RBP8.68□□□□□ -1.02
CDC42-IT1-201ENST00000431803 A0A1W2PR48 441 aa8.67□□□□□ -1.02
CDC42-IT1-201ENST00000431803 NKX2-6A6NCS4 301 aa8.67□□□□□ -1.02
CDC42-IT1-201ENST00000431803 LRRC14BA6NHZ5 514 aa8.67□□□□□ -1.02
CDC42-IT1-201ENST00000431803 LRRC3CA6NJW4 275 aa8.67□□□□□ -1.02
CDC42-IT1-201ENST00000431803 FAM90A27PA6NNH2 459 aa8.67□□□□□ -1.02
CDC42-IT1-201ENST00000431803 DYRK3O43781 588 aa8.67□□□□□ -1.02
CDC42-IT1-201ENST00000431803 TMPRSS11DO60235 418 aa8.67□□□□□ -1.02
CDC42-IT1-201ENST00000431803 EEDO75530 441 aaKnown RBP8.67□□□□□ -1.02
CDC42-IT1-201ENST00000431803 KLHL2O95198 593 aa8.67□□□□□ -1.02
CDC42-IT1-201ENST00000431803 ALDOAP04075 364 aaKnown RBP8.67□□□□□ -1.02
CDC42-IT1-201ENST00000431803 CLPSP04118 112 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms