RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 ARFIP1P53367 373 aa15.78■□□□□ 0.12
UBE3D-204ENST00000430071 MLF1P58340 268 aa15.78■□□□□ 0.12
UBE3D-204ENST00000430071 AP5B1Q2VPB7 878 aa15.78■□□□□ 0.12
UBE3D-204ENST00000430071 ATG16L1Q676U5 607 aa15.78■□□□□ 0.12
UBE3D-204ENST00000430071 ZNF787Q6DD87 383 aa15.78■□□□□ 0.12
UBE3D-204ENST00000430071 GFRALQ6UXV0 394 aa15.78■□□□□ 0.12
UBE3D-204ENST00000430071 METTL4Q8N3J2 472 aa15.78■□□□□ 0.12
UBE3D-204ENST00000430071 SUN3Q8TAQ9 357 aa15.78■□□□□ 0.12
UBE3D-204ENST00000430071 TWIST2Q8WVJ9 160 aa15.78■□□□□ 0.12
UBE3D-204ENST00000430071 SCMH1Q96GD3 660 aa15.78■□□□□ 0.12
UBE3D-204ENST00000430071 UTP23Q9BRU9 249 aaKnown RBP15.78■□□□□ 0.12
UBE3D-204ENST00000430071 NPLQ9BXD5 320 aaPredicted RBP15.78■□□□□ 0.12
UBE3D-204ENST00000430071 ROGDIQ9GZN7 287 aa15.78■□□□□ 0.12
UBE3D-204ENST00000430071 ABI3Q9P2A4 366 aa15.78■□□□□ 0.12
UBE3D-204ENST00000430071 DAPP1Q9UN19 280 aa15.78■□□□□ 0.12
UBE3D-204ENST00000430071 MMACHCQ9Y4U1 282 aa15.78■□□□□ 0.12
UBE3D-204ENST00000430071 A0A088AWK7 358 aa15.77■□□□□ 0.12
UBE3D-204ENST00000430071 KLF11O14901 512 aa15.77■□□□□ 0.12
UBE3D-204ENST00000430071 PIP5K1BO14986 540 aa15.77■□□□□ 0.12
UBE3D-204ENST00000430071 ZG16O60844 167 aa15.77■□□□□ 0.12
UBE3D-204ENST00000430071 UNC5CO95185 931 aa15.77■□□□□ 0.12
UBE3D-204ENST00000430071 CHEK2O96017 543 aa15.77■□□□□ 0.12
UBE3D-204ENST00000430071 GBAP04062 536 aa15.77■□□□□ 0.12
UBE3D-204ENST00000430071 ZNF10P21506 573 aaPredicted RBP15.77■□□□□ 0.12
UBE3D-204ENST00000430071 OCRLQ01968 901 aa15.77■□□□□ 0.12
UBE3D-204ENST00000430071 ID2Q02363 134 aa15.77■□□□□ 0.12
UBE3D-204ENST00000430071 OC90Q02509 493 aaPredicted RBP15.77■□□□□ 0.12
UBE3D-204ENST00000430071 INAQ16352 499 aa15.77■□□□□ 0.12
UBE3D-204ENST00000430071 RNFT1Q5M7Z0 435 aa15.77■□□□□ 0.12
UBE3D-204ENST00000430071 RNF165Q6ZSG1 346 aa15.77■□□□□ 0.12
UBE3D-204ENST00000430071 COMMD6Q7Z4G1 85 aa15.77■□□□□ 0.12
UBE3D-204ENST00000430071 GALNTL5Q7Z4T8 443 aa15.77■□□□□ 0.12
UBE3D-204ENST00000430071 SLC5A8Q8N695 610 aa15.77■□□□□ 0.12
UBE3D-204ENST00000430071 C1orf52Q8N6N3 182 aaKnown RBP15.77■□□□□ 0.12
UBE3D-204ENST00000430071 ZNF321PQ8N8H1 164 aa15.77■□□□□ 0.12
UBE3D-204ENST00000430071 OR2T11Q8NH01 316 aa15.77■□□□□ 0.12
UBE3D-204ENST00000430071 CHTF18Q8WVB6 975 aa15.77■□□□□ 0.12
UBE3D-204ENST00000430071 DDX31Q9H8H2 851 aaKnown RBP15.77■□□□□ 0.12
UBE3D-204ENST00000430071 PNPOQ9NVS9 261 aa15.77■□□□□ 0.12
UBE3D-204ENST00000430071 THAP1Q9NVV9 213 aa15.77■□□□□ 0.12
UBE3D-204ENST00000430071 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.77■□□□□ 0.12
UBE3D-204ENST00000430071 A0A0A6YYD5 115 aa15.76■□□□□ 0.11
UBE3D-204ENST00000430071 TRBV11-1A0A0K0K1C0 115 aa15.76■□□□□ 0.11
UBE3D-204ENST00000430071 TMPRSS11DO60235 418 aa15.76■□□□□ 0.11
UBE3D-204ENST00000430071 LDB3O75112 727 aa15.76■□□□□ 0.11
UBE3D-204ENST00000430071 SNUPNO95149 360 aaKnown RBP15.76■□□□□ 0.11
UBE3D-204ENST00000430071 JUNP05412 331 aaKnown RBP15.76■□□□□ 0.11
UBE3D-204ENST00000430071 LINC00032P0C843 101 aa15.76■□□□□ 0.11
UBE3D-204ENST00000430071 RPL14P50914 215 aaKnown RBP15.76■□□□□ 0.11
UBE3D-204ENST00000430071 TAS2R50P59544 299 aa15.76■□□□□ 0.11
UBE3D-204ENST00000430071 SLC13A2Q13183 592 aa15.76■□□□□ 0.11
UBE3D-204ENST00000430071 SLAMF1Q13291 335 aa15.76■□□□□ 0.11
UBE3D-204ENST00000430071 MRM1Q6IN84 353 aaKnown RBP15.76■□□□□ 0.11
UBE3D-204ENST00000430071 Q6ZSR9 355 aa15.76■□□□□ 0.11
UBE3D-204ENST00000430071 MAMDC2Q7Z304 686 aaPredicted RBP15.76■□□□□ 0.11
UBE3D-204ENST00000430071 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.76■□□□□ 0.11
UBE3D-204ENST00000430071 ZCCHC7Q8N3Z6 543 aaKnown RBP15.76■□□□□ 0.11
UBE3D-204ENST00000430071 B3GNT7Q8NFL0 401 aa15.76■□□□□ 0.11
UBE3D-204ENST00000430071 DYDC1Q8WWB3 177 aa15.76■□□□□ 0.11
UBE3D-204ENST00000430071 CKAP2Q8WWK9 683 aa15.76■□□□□ 0.11
UBE3D-204ENST00000430071 NCLNQ969V3 563 aa15.76■□□□□ 0.11
UBE3D-204ENST00000430071 APIPQ96GX9 242 aa15.76■□□□□ 0.11
UBE3D-204ENST00000430071 NMRK1Q9NWW6 199 aa15.76■□□□□ 0.11
UBE3D-204ENST00000430071 LRFN1Q9P244 771 aa15.76■□□□□ 0.11
UBE3D-204ENST00000430071 EXPH5Q8NEV8 1989 aa15.76■□□□□ 0.11
UBE3D-204ENST00000430071 TMEM200CA6NKL6 621 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 SKAP2O75563 359 aaPredicted RBP15.75■□□□□ 0.11
UBE3D-204ENST00000430071 KLK1P06870 262 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 SP1P08047 785 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 HNRNPH2P55795 449 aaKnown RBP15.75■□□□□ 0.11
UBE3D-204ENST00000430071 HSD17B7P56937 341 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 RAE1P78406 368 aaKnown RBP15.75■□□□□ 0.11
UBE3D-204ENST00000430071 BTKQ06187 659 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 MAPKAPK3Q16644 382 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 IMPG1Q17R60 797 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 SLC25A25Q6KCM7 469 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 NUDT13Q86X67 352 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 DDIASQ8IXT1 998 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 DNAJB8Q8NHS0 232 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 LRRC8CQ8TDW0 803 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 C11orf24Q96F05 449 aaPredicted RBP15.75■□□□□ 0.11
UBE3D-204ENST00000430071 C3orf30Q96M34 536 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 FRMD6Q96NE9 622 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 DEFB126Q9BYW3 111 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 LYRM4Q9HD34 91 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 AHSPQ9NZD4 102 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 SEC14L3Q9UDX4 400 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 SH3BGRL2Q9UJC5 107 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 FBXW2Q9UKT8 454 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 WASHC1A8K0Z3 465 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 SLC28A1O00337 649 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 PRKRAO75569 313 aaKnown RBP15.75■□□□□ 0.11
UBE3D-204ENST00000430071 CRYABP02511 175 aaKnown RBP15.75■□□□□ 0.11
UBE3D-204ENST00000430071 PDCD2Q16342 344 aaPredicted RBP15.75■□□□□ 0.11
UBE3D-204ENST00000430071 XKR7Q5GH72 579 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 SPDYAQ5MJ70 313 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 OR4N5Q8IXE1 308 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 ZNF595Q8IYB9 648 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 LGI4Q8N135 537 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 CPSF7Q8N684 471 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms