RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 RIPK1Q13546 671 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 HNRNPDQ14103 355 aaKnown RBP2.56□□□□□ -2
HMGB1P9-201ENST00000429856 BTG3Q14201 252 aaPredicted RBP2.56□□□□□ -2
HMGB1P9-201ENST00000429856 TMEM132DQ14C87 1099 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 OR1C1Q15619 314 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 TRIP10Q15642 601 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 DUSP5Q16690 384 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 CLPPQ16740 277 aaPredicted RBP2.56□□□□□ -2
HMGB1P9-201ENST00000429856 IL23RQ5VWK5 629 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 PLPP4Q5VZY2 271 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 SNRNP48Q6IEG0 339 aaKnown RBP2.56□□□□□ -2
HMGB1P9-201ENST00000429856 CDC42EP5Q6NZY7 148 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 SLC39A4Q6P5W5 647 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 ZYG11AQ6WRX3 759 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 LEKR1Q6ZMV7 388 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 SH2D5Q6ZV89 423 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 CYP4V2Q6ZWL3 525 aaPredicted RBP2.56□□□□□ -2
HMGB1P9-201ENST00000429856 LHFPL4Q7Z7J7 247 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 CACUL1Q86Y37 369 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 ZNF679Q8IYX0 411 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 DND1Q8IYX4 353 aaKnown RBP2.56□□□□□ -2
HMGB1P9-201ENST00000429856 GCNT2Q8N0V5 402 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 ZCCHC7Q8N3Z6 543 aaKnown RBP2.56□□□□□ -2
HMGB1P9-201ENST00000429856 TCEANCQ8N8B7 351 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 ZNF248Q8NDW4 579 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 STKLD1Q8NE28 680 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 ZNF397Q8NF99 534 aaPredicted RBP2.56□□□□□ -2
HMGB1P9-201ENST00000429856 OR52K2Q8NGK3 314 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 OR6M1Q8NGM8 313 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 OR8J1Q8NGP2 316 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 OR10T2Q8NGX3 314 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 OR2T11Q8NH01 316 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 HCAR2Q8TDS4 363 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 TMEM143Q96AN5 459 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 TUBGCP3Q96CW5 907 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 RPGRIP1Q96KN7 1286 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 CFAP53Q96M91 514 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 RAB40CQ96S21 281 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 PCDHB18PQ96TA0 734 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 LITAFQ99732 161 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 CCM2Q9BSQ5 444 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 NLNQ9BYT8 704 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 PANK2Q9BZ23 570 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 PITPNM3Q9BZ71 974 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 LRRCC1Q9C099 1032 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 POLR1EQ9GZS1 481 aaKnown RBP2.56□□□□□ -2
HMGB1P9-201ENST00000429856 SLC26A1Q9H2B4 701 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 FNDC4Q9H6D8 234 aaPredicted RBP2.56□□□□□ -2
HMGB1P9-201ENST00000429856 ATP13A3Q9H7F0 1226 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 MEAF6Q9HAF1 191 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 SIX2Q9NPC8 291 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.56□□□□□ -2
HMGB1P9-201ENST00000429856 GTSE1Q9NYZ3 720 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 HACD3Q9P035 362 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 COX16Q9P0S2 106 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 ZNF319Q9P2F9 582 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 P2RX2Q9UBL9 471 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 LHX3Q9UBR4 397 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 POLKQ9UBT6 870 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 DBF4Q9UBU7 674 aaPredicted RBP2.56□□□□□ -2
HMGB1P9-201ENST00000429856 MIOXQ9UGB7 285 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 PTBP2Q9UKA9 531 aaKnown RBP2.56□□□□□ -2
HMGB1P9-201ENST00000429856 SNX6Q9UNH7 406 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 B9D1Q9UPM9 204 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 MRPS2Q9Y399 296 aaKnown RBP2.56□□□□□ -2
HMGB1P9-201ENST00000429856 PARD3Q8TEW0 1356 aa2.56□□□□□ -2
HMGB1P9-201ENST00000429856 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 IGHV4-61A0A0C4DH41 118 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 ZSCAN5BA6NJL1 495 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 H3BMH7 237 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 BOLA2-SMG1P6H3BVE0 249 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 K7EQM0 130 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 LGALS8O00214 317 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 SIGLEC5O15389 551 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 GLRA3O75311 464 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 SF3B1O75533 1304 aaKnown RBP eCLIP2.55□□□□□ -2
HMGB1P9-201ENST00000429856 CDK2AP2O75956 126 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 ADCY5O95622 1261 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 IGLV1-44P01699 117 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 IGHV4-59P01825 116 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 SERPINB2P05120 415 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 SERPINF2P08697 491 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 GZMAP12544 262 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 RPA2P15927 270 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 GNB3P16520 340 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 TMOD1P28289 359 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 PTPN6P29350 595 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 GDI1P31150 447 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 CEACAM8P31997 349 aaPredicted RBP2.55□□□□□ -2
HMGB1P9-201ENST00000429856 VEGFCP49767 419 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 DCDC1P59894 354 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 GNB1P62873 340 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 MYL7Q01449 175 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 SRSF9Q13242 221 aaKnown RBP eCLIP2.55□□□□□ -2
HMGB1P9-201ENST00000429856 NFATC2Q13469 925 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 CUL2Q13617 745 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 GRB14Q14449 540 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 MEF2DQ14814 521 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 CAMK4Q16566 473 aa2.55□□□□□ -2
HMGB1P9-201ENST00000429856 C3AR1Q16581 482 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms