RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 STEAP3Q658P3 488 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 LILRA6Q6PI73 481 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 ADIPOR2Q86V24 386 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 SIX5Q8N196 739 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 AQP11Q8NBQ7 271 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 GPR156Q8NFN8 814 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 KLHL6Q8WZ60 621 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 NR4A3Q92570 626 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 AP2M1Q96CW1 435 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 NEURL3Q96EH8 262 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 TMEM80Q96HE8 168 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 DHRS1Q96LJ7 313 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 ZNF607Q96SK3 696 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 NIPSNAP1Q9BPW8 284 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 WRAP53Q9BUR4 548 aaKnown RBP8.27□□□□□ -1.09
GABPB1-205ENST00000429662 SLC46A2Q9BY10 475 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 PCBD2Q9H0N5 130 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 NT5DC2Q9H857 520 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 PELI2Q9HAT8 420 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 NEUROD4Q9HD90 331 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 MIEF1Q9NQG6 463 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 CCDC177Q9NQR7 707 aaPredicted RBP8.27□□□□□ -1.09
GABPB1-205ENST00000429662 GPATCH2Q9NW75 528 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 FAM8A1Q9UBU6 413 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 MBD1Q9UIS9 605 aaPredicted RBP8.27□□□□□ -1.09
GABPB1-205ENST00000429662 GPR34Q9UPC5 381 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 HCFC2Q9Y5Z7 792 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 ANKRD12Q6UB98 2062 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 LOC100506127A0A0U1RQW1 187 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 A0A1W2PRU2 124 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 SLC35F4A4IF30 521 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 SNTNA6NMZ2 147 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 NEDD8-MDP1E9PL57 170 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 TLR4O00206 839 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 TGM5O43548 720 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 VEGFDO43915 354 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 KIAA0513O60268 411 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 MMP20O60882 483 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 UGT2B17O75795 530 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 FGF18O76093 207 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 PTHP01270 115 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 C1QCP02747 245 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 RPN2P04844 631 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 ADH1AP07327 375 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 C8AP07357 584 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 TRAPPC2P0DI81 140 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 TRAPPC2BP0DI82 140 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 ALOX12P18054 663 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 KELP23276 732 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 PSMA1P25786 263 aaKnown RBP8.26□□□□□ -1.09
GABPB1-205ENST00000429662 SOAT1P35610 550 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 MMP12P39900 470 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 PREPP48147 710 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 DGKGP49619 791 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 RORCP51449 518 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 CTSCP53634 463 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 EPHA5P54756 1037 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 TPTEP56180 551 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 TAS2R50P59544 299 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 TRA2BP62995 288 aaKnown RBP8.26□□□□□ -1.09
GABPB1-205ENST00000429662 SHC2P98077 582 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 RUNX1T1Q06455 604 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 RPA4Q13156 261 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 SELENBP1Q13228 472 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 STARD3Q14849 445 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 ARHGAP19Q14CB8 494 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 HEPACAMQ14CZ8 416 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 MLC1Q15049 377 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 MAPK11Q15759 364 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 KCNJ8Q15842 424 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 TSTQ16762 297 aaKnown RBP8.26□□□□□ -1.09
GABPB1-205ENST00000429662 SLC5A12Q1EHB4 618 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 COX20Q5RI15 118 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 DCST1Q5T197 706 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 ATAD3BQ5T9A4 648 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 SAXO2Q658L1 398 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 ZNF770Q6IQ21 691 aaPredicted RBP8.26□□□□□ -1.09
GABPB1-205ENST00000429662 KIAA1211LQ6NV74 962 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 ZNF544Q6NX49 715 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 CASP12Q6UXS9 341 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 CD300LDQ6UXZ3 194 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 LIPIQ6XZB0 460 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 ARMCX6Q7L4S7 300 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 TMEM25Q86YD3 366 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 LRRC56Q8IYG6 542 aaPredicted RBP8.26□□□□□ -1.09
GABPB1-205ENST00000429662 PROKR2Q8NFJ6 384 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 OR4K1Q8NGD4 311 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 OR8J1Q8NGP2 316 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 OR52J3Q8NH60 311 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 WDR36Q8NI36 951 aaKnown RBP8.26□□□□□ -1.09
GABPB1-205ENST00000429662 SLC35B4Q969S0 331 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 RAD51AP1Q96B01 352 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 DTD2Q96FN9 168 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 WDFY2Q96P53 400 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 SLC30A2Q9BRI3 323 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 CHCHD6Q9BRQ6 235 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 SPATA5L1Q9BVQ7 753 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 MND1Q9BWT6 205 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 TAPBPLQ9BX59 468 aa8.26□□□□□ -1.09
GABPB1-205ENST00000429662 ZBP1Q9H171 429 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms