RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 HPCAL1P37235 193 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 GSTM5P46439 218 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 ASMTP46597 345 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 CLCN2P51788 898 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 ERVK-8P63133 956 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 EMX2Q04743 252 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 RPS6KA2Q15349 733 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 LACTB2Q53H82 288 aaPredicted RBP13.58□□□□□ -0.24
SGCE-204ENST00000428696 COLEC12Q5KU26 742 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 ABHD17BQ5VST6 288 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 FAM71E1Q6IPT2 247 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 JMJD6Q6NYC1 403 aaPredicted RBP13.58□□□□□ -0.24
SGCE-204ENST00000428696 ZNF321PQ8N8H1 164 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 MORN4Q8NDC4 146 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 NFAM1Q8NET5 270 aaPredicted RBP13.58□□□□□ -0.24
SGCE-204ENST00000428696 SLC2A12Q8TD20 617 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 PPCDCQ96CD2 204 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 VMP1Q96GC9 406 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 C7orf26Q96N11 449 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 ADNPQ9H2P0 1102 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 CDCP1Q9H5V8 836 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 ZNF552Q9H707 407 aaPredicted RBP13.58□□□□□ -0.24
SGCE-204ENST00000428696 MEAF6Q9HAF1 191 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 MMP25Q9NPA2 562 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 PLA2G3Q9NZ20 509 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 NOP53Q9NZM5 478 aaKnown RBP13.58□□□□□ -0.24
SGCE-204ENST00000428696 BCAP29Q9UHQ4 241 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 TEKT2Q9UIF3 430 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 CES1P1Q9UKY3 287 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 ERVK-19Q9WJR5 959 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 ZNF451Q9Y4E5 1061 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 USH1CQ9Y6N9 552 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 ATMQ13315 3056 aa13.57□□□□□ -0.24
SGCE-204ENST00000428696 A0A1W2PQ72 361 aa13.57□□□□□ -0.24
SGCE-204ENST00000428696 NPIPB8E9PQR5 432 aa13.57□□□□□ -0.24
SGCE-204ENST00000428696 HRKO00198 91 aa13.57□□□□□ -0.24
SGCE-204ENST00000428696 SDHDO14521 159 aa13.57□□□□□ -0.24
SGCE-204ENST00000428696 PRPS2P11908 318 aa13.57□□□□□ -0.24
SGCE-204ENST00000428696 NCBP2P52298 156 aaKnown RBP eCLIP13.57□□□□□ -0.241e-9■■□□□ 13.4
SGCE-204ENST00000428696 PTGR1Q14914 329 aa13.57□□□□□ -0.24
SGCE-204ENST00000428696 LTB4RQ15722 352 aa13.57□□□□□ -0.24
SGCE-204ENST00000428696 PGS1Q32NB8 556 aa13.57□□□□□ -0.24
SGCE-204ENST00000428696 SLC9B1Q4ZJI4 515 aa13.57□□□□□ -0.24
SGCE-204ENST00000428696 ISLR2Q6UXK2 745 aa13.57□□□□□ -0.24
SGCE-204ENST00000428696 HSDL2Q6YN16 418 aa13.57□□□□□ -0.24
SGCE-204ENST00000428696 IKBIPQ70UQ0 350 aa13.57□□□□□ -0.24
SGCE-204ENST00000428696 GALNT12Q8IXK2 581 aa13.57□□□□□ -0.24
SGCE-204ENST00000428696 LRRC25Q8N386 305 aaPredicted RBP13.57□□□□□ -0.24
SGCE-204ENST00000428696 SLC5A8Q8N695 610 aa13.57□□□□□ -0.24
SGCE-204ENST00000428696 TEX19Q8NA77 164 aa13.57□□□□□ -0.24
SGCE-204ENST00000428696 NUDT8Q8WV74 236 aa13.57□□□□□ -0.24
SGCE-204ENST00000428696 SLC39A7Q92504 469 aa13.57□□□□□ -0.24
SGCE-204ENST00000428696 CNRIP1Q96F85 164 aaPredicted RBP13.57□□□□□ -0.24
SGCE-204ENST00000428696 MAGED4Q96JG8 741 aa13.57□□□□□ -0.24
SGCE-204ENST00000428696 REEP4Q9H6H4 257 aa13.57□□□□□ -0.24
SGCE-204ENST00000428696 EPS8L2Q9H6S3 715 aa13.57□□□□□ -0.24
SGCE-204ENST00000428696 ZBTB20Q9HC78 741 aaPredicted RBP13.57□□□□□ -0.24
SGCE-204ENST00000428696 WBP11Q9Y2W2 641 aaKnown RBP13.57□□□□□ -0.24
SGCE-204ENST00000428696 ATXN7O15265 892 aaPredicted RBP13.56□□□□□ -0.24
SGCE-204ENST00000428696 CEACAM4O75871 244 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 ZFAND5O76080 213 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 DDAH2O95865 285 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 PDGFAP04085 211 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 EFNA1P20827 205 aaPredicted RBP13.56□□□□□ -0.24
SGCE-204ENST00000428696 NTSP30990 170 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 AQP5P55064 265 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 DIO3P55073 304 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 SOX8P57073 446 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 IGLV3-21P80748 117 aaPredicted RBP13.56□□□□□ -0.24
SGCE-204ENST00000428696 NFATC3Q12968 1075 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 CRB2Q5IJ48 1285 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 TCTN3Q6NUS6 607 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 FAM111BQ6SJ93 734 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 PCSK4Q6UW60 755 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 ACAD11Q709F0 780 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 R3HCC1LQ7Z5L2 792 aaKnown RBP13.56□□□□□ -0.24
SGCE-204ENST00000428696 RPS19BP1Q86WX3 136 aaKnown RBP13.56□□□□□ -0.24
SGCE-204ENST00000428696 SAMD14Q8IZD0 417 aaPredicted RBP13.56□□□□□ -0.24
SGCE-204ENST00000428696 ZADH2Q8N4Q0 377 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 KRTCAP2Q8N6L1 136 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 OR1N1Q8NGS0 311 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 PSMF1Q92530 271 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 KAT2AQ92830 837 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 ART5Q96L15 291 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 MARK4Q96L34 752 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 ZNF354BQ96LW1 612 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 PRPF18Q99633 342 aaKnown RBP13.56□□□□□ -0.24
SGCE-204ENST00000428696 SLC25A18Q9H1K4 315 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 NPHS2Q9NP85 383 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 ANKRD10Q9NXR5 420 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 ABI3Q9P2A4 366 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 EXO1Q9UQ84 846 aaKnown RBP13.56□□□□□ -0.24
SGCE-204ENST00000428696 PCDHGA9Q9Y5G4 932 aaKnown RBP13.56□□□□□ -0.24
SGCE-204ENST00000428696 KMT2BQ9UMN6 2715 aaPredicted RBP13.56□□□□□ -0.24
SGCE-204ENST00000428696 NUP210LQ5VU65 1888 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 DYTNA2CJ06 578 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 GABRR3A8MPY1 467 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 WWP2O00308 870 aa13.56□□□□□ -0.24
SGCE-204ENST00000428696 PRKNO60260 465 aaPredicted RBP13.56□□□□□ -0.24
SGCE-204ENST00000428696 SSTR4P31391 388 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms