RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 CXCR2P25025 360 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 MAPK12P53778 367 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 MANFP55145 182 aaKnown RBP7.45□□□□□ -1.22
LRCH3-204ENST00000428136 ZNF79Q15937 498 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 ZNF544Q6NX49 715 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 C1orf94Q6P1W5 598 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 FAM83HQ6ZRV2 1179 aaPredicted RBP7.45□□□□□ -1.22
LRCH3-204ENST00000428136 TRAPPC5Q8IUR0 188 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 CLDN22Q8N7P3 220 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 SLC25A46Q96AG3 418 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 ERLEC1Q96DZ1 483 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 IL4I1Q96RQ9 567 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 ZNF607Q96SK3 696 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 WFDC6Q9BQY6 131 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 CNPPD1Q9BV87 410 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 SRRQ9GZT4 340 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 POLR2J3Q9H1A7 115 aaKnown RBP7.45□□□□□ -1.22
LRCH3-204ENST00000428136 DDX31Q9H8H2 851 aaKnown RBP7.45□□□□□ -1.22
LRCH3-204ENST00000428136 C11orf16Q9NQ32 467 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 MUTYHQ9UIF7 546 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 HOXC11O43248 304 aaPredicted RBP7.45□□□□□ -1.22
LRCH3-204ENST00000428136 IGFBP1P08833 259 aaPredicted RBP7.45□□□□□ -1.22
LRCH3-204ENST00000428136 SOX3P41225 446 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 NFE2L1Q14494 772 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 C3orf38Q5JPI3 329 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 CASP12Q6UXS9 341 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 TRMT11Q7Z4G4 463 aaKnown RBP7.45□□□□□ -1.22
LRCH3-204ENST00000428136 UBE3DQ7Z6J8 389 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 DCUN1D3Q8IWE4 304 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 MORN4Q8NDC4 146 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 SLC7A13Q8TCU3 470 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 ARRDC3Q96B67 414 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 TSSK6Q9BXA6 273 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 PCBD2Q9H0N5 130 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 FGF20Q9NP95 211 aaPredicted RBP7.45□□□□□ -1.22
LRCH3-204ENST00000428136 MAN2C1Q9NTJ4 1040 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 ERVK13-1Q9NX77 482 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 SNX8Q9Y5X2 465 aa7.45□□□□□ -1.22
LRCH3-204ENST00000428136 PLXND1Q9Y4D7 1925 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 A0A1W2PPV9 198 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 ANKDD1BA6NHY2 528 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 ANHXE9PGG2 379 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 SLC9A3R1O14745 358 aaPredicted RBP7.44□□□□□ -1.22
LRCH3-204ENST00000428136 SSX4O60224 188 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 ACADMP11310 421 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 S100A1P23297 94 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 POU1F1P28069 291 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 DDOSTP39656 456 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 GPR1P46091 355 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 RPS5P46782 204 aaKnown RBP7.44□□□□□ -1.22
LRCH3-204ENST00000428136 PCYT1AP49585 367 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 METAP1P53582 386 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 CNTN1Q12860 1018 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 LARS2Q15031 903 aaKnown RBP7.44□□□□□ -1.22
LRCH3-204ENST00000428136 SF3B4Q15427 424 aaKnown RBP eCLIP7.44□□□□□ -1.223e-9■■■■□ 22.6
LRCH3-204ENST00000428136 DUSP6Q16828 381 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 FLYWCH1Q4VC44 716 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 C9orf64Q5T6V5 341 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 TNFAIP8L2Q6P589 184 aaPredicted RBP7.44□□□□□ -1.22
LRCH3-204ENST00000428136 ADAMTSL4Q6UY14 1074 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 ERN2Q76MJ5 926 aaKnown RBP7.44□□□□□ -1.22
LRCH3-204ENST00000428136 COMTD1Q86VU5 262 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 RBM45Q8IUH3 476 aaKnown RBP7.44□□□□□ -1.22
LRCH3-204ENST00000428136 CLIP4Q8N3C7 705 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 OR52I1Q8NGK6 324 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 OR5K2Q8NHB8 316 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 KIAA1143Q96AT1 154 aaPredicted RBP7.44□□□□□ -1.22
LRCH3-204ENST00000428136 ZBED6CLQ96FA7 236 aaPredicted RBP7.44□□□□□ -1.22
LRCH3-204ENST00000428136 CAPNS2Q96L46 248 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 SNX18Q96RF0 628 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 F2RL3Q96RI0 385 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 TREX2Q9BQ50 279 aaPredicted RBP7.44□□□□□ -1.22
LRCH3-204ENST00000428136 AIF1LQ9BQI0 150 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 OR2B2Q9GZK3 357 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 ABCG4Q9H172 646 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 MIR1-1HGQ9H1L0 117 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 NEK6Q9HC98 313 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 DNAJC27Q9NZQ0 273 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 WNT6Q9Y6F9 365 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 DNMT3AQ9Y6K1 912 aaPredicted RBP7.44□□□□□ -1.22
LRCH3-204ENST00000428136 OR10H3O60404 316 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 RAB36O95755 333 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 EPPINO95925 133 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 RHOP08100 348 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 MSL3P1P0C860 447 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 CKMT1AP12532 417 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 C6P13671 934 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 OR2B6P58173 313 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 RPS26P62854 115 aaKnown RBP7.44□□□□□ -1.22
LRCH3-204ENST00000428136 ASAH1Q13510 395 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 TP53BP2Q13625 1128 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 ARHGEF6Q15052 776 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 DHCR24Q15392 516 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 SYT14P1Q58G82 188 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 PRAMEF8Q5VWM4 474 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 PRAMEF7Q5VXH5 474 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 PODNL1Q6PEZ8 512 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 HSDL2Q6YN16 418 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 SPATC1Q76KD6 591 aa7.44□□□□□ -1.22
LRCH3-204ENST00000428136 C17orf64Q86WR6 236 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms