RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 UTS2RQ9UKP6 389 aa8.1□□□□□ -1.11
SH3D19-204ENST00000427414 SH2B3Q9UQQ2 575 aa8.1□□□□□ -1.11
SH3D19-204ENST00000427414 PCDHB14Q9Y5E9 798 aa8.1□□□□□ -1.11
SH3D19-204ENST00000427414 ORC6Q9Y5N6 252 aa8.1□□□□□ -1.11
SH3D19-204ENST00000427414 U3KQV3 271 aa8.1□□□□□ -1.11
SH3D19-204ENST00000427414 IGKV1-8A0A0C4DH67 115 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 C1orf226A1L170 272 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 PRR23AA6NEV1 266 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 BCKDKO14874 412 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 DFNA5O60443 496 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 FADS2O95864 444 aaKnown RBP8.09□□□□□ -1.11
SH3D19-204ENST00000427414 SMIM10L1P0DMW3 83 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 CTSEP14091 401 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 SPNP16150 400 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 CLK1P49759 484 aaKnown RBP8.09□□□□□ -1.11
SH3D19-204ENST00000427414 IL1RL1Q01638 556 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 RGS1Q08116 209 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 RAPSNQ13702 412 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 UBXN2BQ14CS0 331 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 ZNF181Q2M3W8 571 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 SMUG1Q53HV7 270 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 TMEM64Q6YI46 380 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 RNF44Q7L0R7 432 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 CACUL1Q86Y37 369 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 SVOPLQ8N434 492 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 ANKRD53Q8N9V6 530 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 PPCDCQ96CD2 204 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 SMIM10Q96HG1 83 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 IL17FQ96PD4 163 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 TSSK3Q96PN8 268 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 REXO4Q9GZR2 422 aaKnown RBP8.09□□□□□ -1.11
SH3D19-204ENST00000427414 TMEM168Q9H0V1 697 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 SLC6A20Q9NP91 592 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 PRMT8Q9NR22 394 aaPredicted RBP8.09□□□□□ -1.11
SH3D19-204ENST00000427414 MS4A12Q9NXJ0 267 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 SLC25A37Q9NYZ2 338 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 USE1Q9NZ43 259 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 CPNE7Q9UBL6 633 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 EPHA6Q9UF33 1036 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 MOSPD1Q9UJG1 213 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 INVSQ9Y283 1065 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 TPRKBQ9Y3C4 175 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 PCDHGA10Q9Y5H3 936 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 GNG14A0A1W2PPG7 69 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 SYNDIG1LA6NDD5 238 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 SAGE2PA6NJ88 616 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 K7ESF4 209 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 TLR4O00206 839 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 PLPP1O14494 284 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 KLHL18O94889 574 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 MFN2O95140 757 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 TBX6O95947 436 aaPredicted RBP8.09□□□□□ -1.11
SH3D19-204ENST00000427414 TACR1P25103 407 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 PEBP1P30086 187 aaKnown RBP8.09□□□□□ -1.11
SH3D19-204ENST00000427414 RYKP34925 604 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 DGKQP52824 942 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 HNRNPKP61978 463 aaKnown RBP eCLIP8.09□□□□□ -1.116e-12■■□□□ 13.4
SH3D19-204ENST00000427414 CCDC85BQ15834 202 aaPredicted RBP8.09□□□□□ -1.11
SH3D19-204ENST00000427414 NKG7Q16617 165 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 SYT6Q5T7P8 510 aaPredicted RBP8.09□□□□□ -1.11
SH3D19-204ENST00000427414 MED25Q71SY5 747 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 RABEPKQ7Z6M1 372 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 TRIM48Q8IWZ4 208 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 KRTCAP2Q8N6L1 136 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 FAM83FQ8NEG4 500 aaPredicted RBP8.09□□□□□ -1.11
SH3D19-204ENST00000427414 SFXN5Q8TD22 340 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 PROX1Q92786 737 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 SLC47A1Q96FL8 570 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 OR2A14Q96R47 310 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 C6orf62Q9GZU0 229 aaPredicted RBP8.09□□□□□ -1.11
SH3D19-204ENST00000427414 SCN3BQ9NY72 215 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.09□□□□□ -1.11
SH3D19-204ENST00000427414 PHF11Q9UIL8 331 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 RPS6KA6Q9UK32 745 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 PILRAQ9UKJ1 303 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 SIT1Q9Y3P8 196 aa8.09□□□□□ -1.11
SH3D19-204ENST00000427414 A0A0J9YY10 115 aa8.08□□□□□ -1.12
SH3D19-204ENST00000427414 EFCAB9A8MZ26 197 aa8.08□□□□□ -1.12
SH3D19-204ENST00000427414 CENPBD1B2RD01 187 aa8.08□□□□□ -1.12
SH3D19-204ENST00000427414 TAF4O00268 1085 aa8.08□□□□□ -1.12
SH3D19-204ENST00000427414 OR1F1O43749 312 aa8.08□□□□□ -1.12
SH3D19-204ENST00000427414 PRKD3O94806 890 aa8.08□□□□□ -1.12
SH3D19-204ENST00000427414 MT-ND2P03891 347 aa8.08□□□□□ -1.12
SH3D19-204ENST00000427414 CD36P16671 472 aa8.08□□□□□ -1.12
SH3D19-204ENST00000427414 UQCRC2P22695 453 aa8.08□□□□□ -1.12
SH3D19-204ENST00000427414 ACVR2AP27037 513 aa8.08□□□□□ -1.12
SH3D19-204ENST00000427414 GTF2E2P29084 291 aaKnown RBP8.08□□□□□ -1.12
SH3D19-204ENST00000427414 ANXA11P50995 505 aaKnown RBP8.08□□□□□ -1.12
SH3D19-204ENST00000427414 MAPK12P53778 367 aa8.08□□□□□ -1.12
SH3D19-204ENST00000427414 NXPH1P58417 271 aa8.08□□□□□ -1.12
SH3D19-204ENST00000427414 SKP1P63208 163 aa8.08□□□□□ -1.12
SH3D19-204ENST00000427414 ZNF404Q494X3 552 aa8.08□□□□□ -1.12
SH3D19-204ENST00000427414 GALNT5Q7Z7M9 940 aa8.08□□□□□ -1.12
SH3D19-204ENST00000427414 TMEM179BQ7Z7N9 219 aa8.08□□□□□ -1.12
SH3D19-204ENST00000427414 OOSP2Q86WS3 158 aa8.08□□□□□ -1.12
SH3D19-204ENST00000427414 CAMKVQ8NCB2 501 aa8.08□□□□□ -1.12
SH3D19-204ENST00000427414 ZNF540Q8NDQ6 660 aa8.08□□□□□ -1.12
SH3D19-204ENST00000427414 OR6C4Q8NGE1 309 aa8.08□□□□□ -1.12
SH3D19-204ENST00000427414 OR52N2Q8NGI0 321 aa8.08□□□□□ -1.12
SH3D19-204ENST00000427414 ADAMTS18Q8TE60 1221 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms