RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 NAGLUP54802 743 aa12.92□□□□□ -0.34
HDAC6-206ENST00000426196 NR1H2P55055 460 aa12.92□□□□□ -0.34
HDAC6-206ENST00000426196 PLIN5Q00G26 463 aa12.92□□□□□ -0.34
HDAC6-206ENST00000426196 FAM27E3Q08E93 113 aa12.92□□□□□ -0.34
HDAC6-206ENST00000426196 PDAP1Q13442 181 aaKnown RBP12.92□□□□□ -0.34
HDAC6-206ENST00000426196 SLBPQ14493 270 aaKnown RBP eCLIP12.92□□□□□ -0.34
HDAC6-206ENST00000426196 CCNG2Q16589 344 aa12.92□□□□□ -0.34
HDAC6-206ENST00000426196 ADPRMQ3LIE5 342 aa12.92□□□□□ -0.34
HDAC6-206ENST00000426196 ABHD17CQ6PCB6 329 aa12.92□□□□□ -0.34
HDAC6-206ENST00000426196 DRICH1Q6PGQ1 229 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-206ENST00000426196 CAND1Q86VP6 1230 aaKnown RBP12.92□□□□□ -0.34
HDAC6-206ENST00000426196 HS3ST6Q96QI5 342 aa12.92□□□□□ -0.34
HDAC6-206ENST00000426196 WWTR1Q9GZV5 400 aa12.92□□□□□ -0.34
HDAC6-206ENST00000426196 REXO2Q9Y3B8 237 aaKnown RBP12.92□□□□□ -0.34
HDAC6-206ENST00000426196 CD5LO43866 347 aa12.91□□□□□ -0.34
HDAC6-206ENST00000426196 SMNDC1O75940 238 aaKnown RBP eCLIP12.91□□□□□ -0.34
HDAC6-206ENST00000426196 SOX30O94993 753 aa12.91□□□□□ -0.34
HDAC6-206ENST00000426196 C1GALT1C1LP0DN25 315 aa12.91□□□□□ -0.34
HDAC6-206ENST00000426196 CPN1P15169 458 aa12.91□□□□□ -0.34
HDAC6-206ENST00000426196 SOX18P35713 384 aa12.91□□□□□ -0.34
HDAC6-206ENST00000426196 CD79BP40259 229 aa12.91□□□□□ -0.34
HDAC6-206ENST00000426196 KCNC1P48547 511 aa12.91□□□□□ -0.34
HDAC6-206ENST00000426196 CDKN2DP55273 166 aa12.91□□□□□ -0.34
HDAC6-206ENST00000426196 RPP38P78345 283 aaKnown RBP12.91□□□□□ -0.34
HDAC6-206ENST00000426196 CAPRIN1Q14444 709 aaKnown RBP12.91□□□□□ -0.34
HDAC6-206ENST00000426196 HSP90AA5PQ58FG0 334 aa12.91□□□□□ -0.34
HDAC6-206ENST00000426196 BICRALQ6AI39 1079 aa12.91□□□□□ -0.34
HDAC6-206ENST00000426196 ENPP6Q6UWR7 440 aa12.91□□□□□ -0.34
HDAC6-206ENST00000426196 RNF111Q6ZNA4 994 aa12.91□□□□□ -0.34
HDAC6-206ENST00000426196 ANKRD9Q96BM1 317 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-206ENST00000426196 RBM18Q96H35 190 aaKnown RBP12.91□□□□□ -0.34
HDAC6-206ENST00000426196 KCNC2Q96PR1 638 aa12.91□□□□□ -0.34
HDAC6-206ENST00000426196 UCN2Q96RP3 112 aa12.91□□□□□ -0.34
HDAC6-206ENST00000426196 PIGQQ9BRB3 760 aa12.91□□□□□ -0.34
HDAC6-206ENST00000426196 ROGDIQ9GZN7 287 aa12.91□□□□□ -0.34
HDAC6-206ENST00000426196 IARS2Q9NSE4 1012 aaKnown RBP12.91□□□□□ -0.34
HDAC6-206ENST00000426196 FETUBQ9UGM5 382 aa12.91□□□□□ -0.34
HDAC6-206ENST00000426196 A0A087X1B8 175 aa12.9□□□□□ -0.34
HDAC6-206ENST00000426196 HRKO00198 91 aa12.9□□□□□ -0.34
HDAC6-206ENST00000426196 CHMP24386 653 aa12.9□□□□□ -0.34
HDAC6-206ENST00000426196 TMED10P49755 219 aaKnown RBP12.9□□□□□ -0.34
HDAC6-206ENST00000426196 FBXW4P57775 412 aa12.9□□□□□ -0.34
HDAC6-206ENST00000426196 SRYQ05066 204 aa12.9□□□□□ -0.34
HDAC6-206ENST00000426196 GPS1Q13098 491 aa12.9□□□□□ -0.34
HDAC6-206ENST00000426196 BIKQ13323 160 aa12.9□□□□□ -0.34
HDAC6-206ENST00000426196 CLEC12BQ2HXU8 276 aa12.9□□□□□ -0.34
HDAC6-206ENST00000426196 RBM20Q5T481 1227 aaKnown RBP12.9□□□□□ -0.34
HDAC6-206ENST00000426196 FNDC7Q5VTL7 733 aa12.9□□□□□ -0.34
HDAC6-206ENST00000426196 SBSNQ6UWP8 590 aa12.9□□□□□ -0.34
HDAC6-206ENST00000426196 SLCO4C1Q6ZQN7 724 aa12.9□□□□□ -0.34
HDAC6-206ENST00000426196 YRDCQ86U90 279 aaKnown RBP12.9□□□□□ -0.34
HDAC6-206ENST00000426196 GRAMD2AQ8IUY3 354 aa12.9□□□□□ -0.34
HDAC6-206ENST00000426196 C2CD4AQ8NCU7 369 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-206ENST00000426196 SRFBP1Q8NEF9 429 aaKnown RBP12.9□□□□□ -0.34
HDAC6-206ENST00000426196 FAM83FQ8NEG4 500 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-206ENST00000426196 SPPL2AQ8TCT8 520 aa12.9□□□□□ -0.34
HDAC6-206ENST00000426196 IGFBPL1Q8WX77 278 aa12.9□□□□□ -0.34
HDAC6-206ENST00000426196 ZC3HAV1LQ96H79 300 aaKnown RBP12.9□□□□□ -0.34
HDAC6-206ENST00000426196 TMEM41AQ96HV5 264 aa12.9□□□□□ -0.34
HDAC6-206ENST00000426196 MAPKAP1Q9BPZ7 522 aa12.9□□□□□ -0.34
HDAC6-206ENST00000426196 ANGPTL4Q9BY76 406 aa12.9□□□□□ -0.34
HDAC6-206ENST00000426196 REG4Q9BYZ8 158 aa12.9□□□□□ -0.34
HDAC6-206ENST00000426196 AMBRA1Q9C0C7 1298 aa12.9□□□□□ -0.34
HDAC6-206ENST00000426196 PITHD1Q9GZP4 211 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-206ENST00000426196 XAB2Q9HCS7 855 aaKnown RBP12.9□□□□□ -0.34
HDAC6-206ENST00000426196 TEX10Q9NXF1 929 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-206ENST00000426196 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 A0A1W2PNV4 684 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 OR6C76A6NM76 312 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 CDC7O00311 574 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 GNB5O14775 395 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 FGF17O60258 216 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 CDH16O75309 829 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 TNFSF13O75888 250 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 WDR47O94967 919 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 FAM157CP0CG43 387 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 MLNP12872 115 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 POU2F1P14859 743 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 CPN2P22792 545 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 UGT2B10P36537 528 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 MAGEA6P43360 314 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 HERVK_113P63132 956 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 ERVK-8P63133 956 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 IGLV3-21P80748 117 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-206ENST00000426196 KIF5AQ12840 1032 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 EBPQ15125 230 aaKnown RBP12.89□□□□□ -0.35
HDAC6-206ENST00000426196 ETFDHQ16134 617 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 TIGD3Q6B0B8 471 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 BTLAQ7Z6A9 289 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 ADGRE4PQ86SQ3 457 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 OR4N5Q8IXE1 308 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 TXLNBQ8N3L3 684 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 PPWD1Q96BP3 646 aaKnown RBP12.89□□□□□ -0.35
HDAC6-206ENST00000426196 MARK4Q96L34 752 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 EGFL8Q99944 293 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 SLC39A3Q9BRY0 314 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 ERVK-6Q9BXR3 956 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 NT5DC2Q9H857 520 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 PRM3Q9NNZ6 103 aa12.89□□□□□ -0.35
HDAC6-206ENST00000426196 PRDM7Q9NQW5 492 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms