RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 GPR83Q9NYM4 423 aa22.83■■□□□ 1.25
VEGFA-209ENST00000425836 PCDHGA9Q9Y5G4 932 aaKnown RBP22.83■■□□□ 1.25
VEGFA-209ENST00000425836 ITPR1Q14643 2758 aa22.83■■□□□ 1.24
VEGFA-209ENST00000425836 DIAPH2O60879 1101 aa22.82■■□□□ 1.24
VEGFA-209ENST00000425836 PDE7AQ13946 482 aa22.82■■□□□ 1.24
VEGFA-209ENST00000425836 CEBPEQ15744 281 aa22.82■■□□□ 1.24
VEGFA-209ENST00000425836 IRAK1BP1Q5VVH5 260 aa22.82■■□□□ 1.24
VEGFA-209ENST00000425836 NXNQ6DKJ4 435 aa22.82■■□□□ 1.24
VEGFA-209ENST00000425836 ANKRD26P1Q6NSI1 321 aa22.82■■□□□ 1.24
VEGFA-209ENST00000425836 SAMD14Q8IZD0 417 aaPredicted RBP22.82■■□□□ 1.24
VEGFA-209ENST00000425836 LRRC25Q8N386 305 aaPredicted RBP22.82■■□□□ 1.24
VEGFA-209ENST00000425836 ZNF321PQ8N8H1 164 aa22.82■■□□□ 1.24
VEGFA-209ENST00000425836 SLC2A12Q8TD20 617 aa22.82■■□□□ 1.24
VEGFA-209ENST00000425836 WBP1Q96G27 269 aa22.82■■□□□ 1.24
VEGFA-209ENST00000425836 OR8D2Q9GZM6 311 aa22.82■■□□□ 1.24
VEGFA-209ENST00000425836 CXorf21Q9HAI6 301 aa22.82■■□□□ 1.24
VEGFA-209ENST00000425836 TUBD1Q9UJT1 453 aa22.82■■□□□ 1.24
VEGFA-209ENST00000425836 ENTPD4Q9Y227 616 aa22.82■■□□□ 1.24
VEGFA-209ENST00000425836 GABRR3A8MPY1 467 aa22.81■■□□□ 1.24
VEGFA-209ENST00000425836 HRKO00198 91 aa22.81■■□□□ 1.24
VEGFA-209ENST00000425836 TBX19O60806 448 aa22.81■■□□□ 1.24
VEGFA-209ENST00000425836 ATP1B1P05026 303 aa22.81■■□□□ 1.24
VEGFA-209ENST00000425836 ALDOCP09972 364 aaKnown RBP22.81■■□□□ 1.24
VEGFA-209ENST00000425836 IDH3AP50213 366 aa22.81■■□□□ 1.24
VEGFA-209ENST00000425836 AQP5P55064 265 aa22.81■■□□□ 1.24
VEGFA-209ENST00000425836 ZNF267Q14586 743 aaPredicted RBP22.81■■□□□ 1.24
VEGFA-209ENST00000425836 SPRED3Q2MJR0 410 aa22.81■■□□□ 1.24
VEGFA-209ENST00000425836 SPATA19Q7Z5L4 167 aa22.81■■□□□ 1.24
VEGFA-209ENST00000425836 CCDC116Q8IYX3 515 aa22.81■■□□□ 1.24
VEGFA-209ENST00000425836 OR1N1Q8NGS0 311 aa22.81■■□□□ 1.24
VEGFA-209ENST00000425836 VMP1Q96GC9 406 aa22.81■■□□□ 1.24
VEGFA-209ENST00000425836 ZNF764Q96H86 408 aaPredicted RBP22.81■■□□□ 1.24
VEGFA-209ENST00000425836 KCNK13Q9HB14 408 aa22.81■■□□□ 1.24
VEGFA-209ENST00000425836 GIMAP4Q9NUV9 329 aa22.81■■□□□ 1.24
VEGFA-209ENST00000425836 ATP6V1HQ9UI12 483 aa22.81■■□□□ 1.24
VEGFA-209ENST00000425836 ZNF223Q9UK11 482 aaPredicted RBP22.81■■□□□ 1.24
VEGFA-209ENST00000425836 KMT2BQ9UMN6 2715 aaPredicted RBP22.81■■□□□ 1.24
VEGFA-209ENST00000425836 MYO1GB0I1T2 1018 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 DYRK3O43781 588 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 NT5EP21589 574 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 CLDN8P56748 225 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 ZNF385BQ569K4 471 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 H3F3CQ6NXT2 135 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 GALNT12Q8IXK2 581 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 RIMKLAQ8IXN7 391 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 KRTCAP2Q8N6L1 136 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 SIRT6Q8N6T7 355 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 CEP70Q8NHQ1 597 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 ZNF721Q8TF20 911 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 NUDT8Q8WV74 236 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 PPCDCQ96CD2 204 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 MTERF3Q96E29 417 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 FBXL20Q96IG2 436 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 UBL7Q96S82 380 aaPredicted RBP22.8■■□□□ 1.24
VEGFA-209ENST00000425836 SMAD5Q99717 465 aaKnown RBP22.8■■□□□ 1.24
VEGFA-209ENST00000425836 EBF4Q9BQW3 602 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 CNPPD1Q9BV87 410 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 SEMA4CQ9C0C4 833 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 SH3BP4Q9P0V3 963 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 A8MUI8 341 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 K7EM74 188 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 SCAMP2O15127 329 aaKnown RBP22.8■■□□□ 1.24
VEGFA-209ENST00000425836 IGKV3-11P04433 115 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 CT62P0C5K7 136 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 PRPS1L1P21108 318 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 PTGER1P34995 402 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 CLCN2P51788 898 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 MGAT2Q10469 447 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 LSM12Q3MHD2 195 aaKnown RBP22.8■■□□□ 1.24
VEGFA-209ENST00000425836 AGAP7PQ5VUJ5 663 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 R3HCC1LQ7Z5L2 792 aaKnown RBP22.8■■□□□ 1.24
VEGFA-209ENST00000425836 SUN3Q8TAQ9 357 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 THOC1Q96FV9 657 aaKnown RBP22.8■■□□□ 1.24
VEGFA-209ENST00000425836 AGAP4Q96P64 663 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 BBS4Q96RK4 519 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 AIG1Q9NVV5 245 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 PTGFRNQ9P2B2 879 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 G3BP2Q9UN86 482 aaKnown RBP22.8■■□□□ 1.24
VEGFA-209ENST00000425836 ERVK-19Q9WJR5 959 aa22.8■■□□□ 1.24
VEGFA-209ENST00000425836 TRBV11-1A0A0K0K1C0 115 aa22.79■■□□□ 1.24
VEGFA-209ENST00000425836 PDGFAP04085 211 aa22.79■■□□□ 1.24
VEGFA-209ENST00000425836 SOX18P35713 384 aa22.79■■□□□ 1.24
VEGFA-209ENST00000425836 HPCAL1P37235 193 aa22.79■■□□□ 1.24
VEGFA-209ENST00000425836 C21orf58P58505 322 aa22.79■■□□□ 1.24
VEGFA-209ENST00000425836 LTB4RQ15722 352 aa22.79■■□□□ 1.24
VEGFA-209ENST00000425836 MPEG1Q2M385 716 aa22.79■■□□□ 1.24
VEGFA-209ENST00000425836 PRICKLE4Q2TBC4 344 aa22.79■■□□□ 1.24
VEGFA-209ENST00000425836 TMEM198Q66K66 360 aa22.79■■□□□ 1.24
VEGFA-209ENST00000425836 B3GNTL1Q67FW5 361 aaPredicted RBP22.79■■□□□ 1.24
VEGFA-209ENST00000425836 TCTN3Q6NUS6 607 aa22.79■■□□□ 1.24
VEGFA-209ENST00000425836 ACAD11Q709F0 780 aa22.79■■□□□ 1.24
VEGFA-209ENST00000425836 ADCY4Q8NFM4 1077 aa22.79■■□□□ 1.24
VEGFA-209ENST00000425836 OR7A2PQ8NGA2 310 aa22.79■■□□□ 1.24
VEGFA-209ENST00000425836 FGFR1OP2Q9NVK5 253 aa22.79■■□□□ 1.24
VEGFA-209ENST00000425836 MED13Q9UHV7 2174 aa22.79■■□□□ 1.24
VEGFA-209ENST00000425836 ANKRD28O15084 1053 aa22.78■■□□□ 1.24
VEGFA-209ENST00000425836 KLHL41O60662 606 aa22.78■■□□□ 1.24
VEGFA-209ENST00000425836 VIMP08670 466 aaKnown RBP22.78■■□□□ 1.24
VEGFA-209ENST00000425836 MPIP34949 423 aa22.78■■□□□ 1.24
VEGFA-209ENST00000425836 SOX11P35716 441 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms