RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 ANKMY2Q8IV38 441 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 OR4N5Q8IXE1 308 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 FBXO36Q8NEA4 188 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 TNIP2Q8NFZ5 429 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ZNF473Q8WTR7 871 aaKnown RBP11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 PYROXD1Q8WU10 500 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ABTB1Q969K4 478 aaPredicted RBP11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 PIGTQ969N2 578 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ZFP3Q96NJ6 502 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 MS4A8Q9BY19 250 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 AICDAQ9GZX7 198 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 DDX47Q9H0S4 455 aaKnown RBP11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 NMRAL1Q9HBL8 299 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SPRR3Q9UBC9 169 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CLDN16Q9Y5I7 305 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 NPFFR2Q9Y5X5 522 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 TEX264Q9Y6I9 313 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 IKBKGQ9Y6K9 419 aa11.27□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CLCA1A8K7I4 914 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SYCE1LA8MT33 242 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 FGF17O60258 216 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 GUCY1B2O75343 617 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ACTL6AO96019 429 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 RFPL3SP0C7P2 107 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 PIK3R1P27986 724 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 PIK3CBP42338 1070 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 PAFAH1B1P43034 410 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 NR0B1P51843 470 aaKnown RBP11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 PGGT1BP53609 377 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 HERVK_113P63132 956 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ERVK-8P63133 956 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 IGLV3-21P80748 117 aaPredicted RBP11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 DR1Q01658 176 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 DDX39BQ13838 428 aaKnown RBP11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ZNF460Q14592 562 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 RPS6KA2Q15349 733 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 NTRK2Q16620 822 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SPRED3Q2MJR0 410 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ACSF3Q4G176 576 aaPredicted RBP11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 STEAP4Q687X5 459 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 VASNQ6EMK4 673 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 TBC1D1Q86TI0 1168 aaPredicted RBP11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 IGDCC3Q8IVU1 814 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 C9orf40Q8IXQ3 194 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 OR10G3Q8NGC4 313 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 OR1J4Q8NGS1 313 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 NUDT8Q8WV74 236 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ANKRD49Q8WVL7 239 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ESAMQ96AP7 390 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 DACH2Q96NX9 599 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 BDH2Q9BUT1 245 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 RBM24Q9BX46 236 aaKnown RBP11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ERVK-6Q9BXR3 956 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 WWTR1Q9GZV5 400 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 METTL7AQ9H8H3 244 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 MOCS1Q9NZB8 636 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 AHSPQ9NZD4 102 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SLC17A6Q9P2U8 582 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 PTBP2Q9UKA9 531 aaKnown RBP11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 IKZF3Q9UKT9 509 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ERVK-19Q9WJR5 959 aa11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 RPH3AQ9Y2J0 694 aaPredicted RBP11.26□□□□□ -0.61
HLA-DQB3-203ENST00000425319 A0A1B0GTL3 188 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 K7EPI3 171 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SAP18O00422 153 aaKnown RBP11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 RTCAO00442 366 aaKnown RBP11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 TAPBPO15533 448 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SMPD2O60906 423 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SH3BGRLO75368 114 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SCELO95171 688 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 IGKV3-11P04433 115 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 HPNP05981 417 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SLC35E2BP0CK96 405 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SLC35E2P0CK97 266 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 TMIGD3P0DMS9 266 aaPredicted RBP11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CHMP24386 653 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SPRP35270 261 aaPredicted RBP11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CDK9P50750 372 aaKnown RBP11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 DCAF7P61962 342 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 TNFRSF17Q02223 184 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CALCOCO2Q13137 446 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 LIPJQ5W064 366 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 LAS2Q8IYD9 372 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ZBED8Q8IZ13 594 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ZCCHC7Q8N3Z6 543 aaKnown RBP11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 RELL2Q8NC24 303 aaPredicted RBP11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 OR7G3Q8NG95 312 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 LINC01560Q8TB33 94 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ZPLD1Q8TCW7 415 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 EXT2Q93063 718 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CPNE1Q99829 537 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 SH3GL2Q99962 352 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ANGPTL4Q9BY76 406 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 PRDM14Q9GZV8 571 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 OR51B5Q9H339 312 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 PIGMQ9H3S5 423 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 ZNF226Q9NYT6 803 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 NUDT4Q9NZJ9 180 aa11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 CNOT11Q9UKZ1 510 aaKnown RBP11.25□□□□□ -0.61
HLA-DQB3-203ENST00000425319 PSME2Q9UL46 239 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms