RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ST13P4Q8IZP2 240 aaPredicted RBP24.97■■□□□ 1.59
LDB1-202ENST00000425280 OR5D16Q8NGK9 328 aa24.97■■□□□ 1.59
LDB1-202ENST00000425280 MOAP1Q96BY2 351 aa24.97■■□□□ 1.59
LDB1-202ENST00000425280 BARD1Q99728 777 aaKnown RBP24.97■■□□□ 1.59
LDB1-202ENST00000425280 THUMPD1Q9NXG2 353 aaKnown RBP24.97■■□□□ 1.59
LDB1-202ENST00000425280 ALBP02768 609 aa24.96■■□□□ 1.59
LDB1-202ENST00000425280 FHP07954 510 aa24.96■■□□□ 1.59
LDB1-202ENST00000425280 NELFEP18615 380 aaKnown RBP24.96■■□□□ 1.59
LDB1-202ENST00000425280 BHLHB9Q6PI77 547 aa24.96■■□□□ 1.59
LDB1-202ENST00000425280 DNAJC22Q8N4W6 341 aa24.96■■□□□ 1.59
LDB1-202ENST00000425280 SMYD1Q8NB12 490 aa24.96■■□□□ 1.59
LDB1-202ENST00000425280 OR56A1Q8NGH5 318 aa24.96■■□□□ 1.59
LDB1-202ENST00000425280 RDH12Q96NR8 316 aa24.96■■□□□ 1.59
LDB1-202ENST00000425280 PRDM9Q9NQV7 894 aa24.96■■□□□ 1.59
LDB1-202ENST00000425280 PNPLA3Q9NST1 481 aa24.96■■□□□ 1.59
LDB1-202ENST00000425280 TRPC4Q9UBN4 977 aa24.96■■□□□ 1.59
LDB1-202ENST00000425280 CACNA1IQ9P0X4 2223 aa24.96■■□□□ 1.59
LDB1-202ENST00000425280 MYOCOSA0A1B0GUC4 107 aa24.95■■□□□ 1.59
LDB1-202ENST00000425280 PRAMEF27A3QJZ7 478 aa24.95■■□□□ 1.59
LDB1-202ENST00000425280 H0YAE9 185 aa24.95■■□□□ 1.59
LDB1-202ENST00000425280 KIF1CO43896 1103 aaKnown RBP24.95■■□□□ 1.59
LDB1-202ENST00000425280 DPM1O60762 260 aa24.95■■□□□ 1.59
LDB1-202ENST00000425280 PGM3O95394 542 aa24.95■■□□□ 1.59
LDB1-202ENST00000425280 CLIC3O95833 236 aa24.95■■□□□ 1.59
LDB1-202ENST00000425280 HOXA6P31267 233 aa24.95■■□□□ 1.59
LDB1-202ENST00000425280 DNAJA1P31689 397 aaKnown RBP24.95■■□□□ 1.59
LDB1-202ENST00000425280 MC3RP41968 323 aa24.95■■□□□ 1.59
LDB1-202ENST00000425280 LTB4RQ15722 352 aa24.95■■□□□ 1.59
LDB1-202ENST00000425280 ZC3H12BQ5HYM0 836 aaKnown RBP24.95■■□□□ 1.59
LDB1-202ENST00000425280 SHISA5Q8N114 240 aa24.95■■□□□ 1.59
LDB1-202ENST00000425280 OR4K14Q8NGD5 310 aa24.95■■□□□ 1.59
LDB1-202ENST00000425280 ELP4Q96EB1 424 aa24.95■■□□□ 1.59
LDB1-202ENST00000425280 NDUFAF4Q9P032 175 aa24.95■■□□□ 1.59
LDB1-202ENST00000425280 PRAMEF25A6NGN4 478 aa24.95■■□□□ 1.58
LDB1-202ENST00000425280 EMC8O43402 210 aa24.95■■□□□ 1.58
LDB1-202ENST00000425280 SMIM18P0DKX4 95 aa24.95■■□□□ 1.58
LDB1-202ENST00000425280 MAGEA8P43361 318 aa24.95■■□□□ 1.58
LDB1-202ENST00000425280 OR1E2P47887 323 aa24.95■■□□□ 1.58
LDB1-202ENST00000425280 KHKP50053 298 aa24.95■■□□□ 1.58
LDB1-202ENST00000425280 XKP51811 444 aa24.95■■□□□ 1.58
LDB1-202ENST00000425280 USP51Q70EK9 711 aa24.95■■□□□ 1.58
LDB1-202ENST00000425280 LRRC25Q8N386 305 aaPredicted RBP24.95■■□□□ 1.58
LDB1-202ENST00000425280 ARHGEF39Q8N4T4 335 aa24.95■■□□□ 1.58
LDB1-202ENST00000425280 OR5T3Q8NGG3 340 aa24.95■■□□□ 1.58
LDB1-202ENST00000425280 XAGE5Q8WWM1 108 aa24.95■■□□□ 1.58
LDB1-202ENST00000425280 GABARAPL1Q9H0R8 117 aa24.95■■□□□ 1.58
LDB1-202ENST00000425280 COL6A3P12111 3177 aa24.94■■□□□ 1.58
LDB1-202ENST00000425280 HMGN2P05204 90 aaKnown RBP24.94■■□□□ 1.58
LDB1-202ENST00000425280 FPR1P21462 350 aa24.94■■□□□ 1.58
LDB1-202ENST00000425280 ZXDAP98168 799 aa24.94■■□□□ 1.58
LDB1-202ENST00000425280 LAPTM4AQ15012 233 aa24.94■■□□□ 1.58
LDB1-202ENST00000425280 CYP27C1Q4G0S4 372 aa24.94■■□□□ 1.58
LDB1-202ENST00000425280 ARMC8Q8IUR7 673 aa24.94■■□□□ 1.58
LDB1-202ENST00000425280 OR4N5Q8IXE1 308 aa24.94■■□□□ 1.58
LDB1-202ENST00000425280 TCTN2Q96GX1 697 aa24.94■■□□□ 1.58
LDB1-202ENST00000425280 TOR3AQ9H497 397 aa24.94■■□□□ 1.58
LDB1-202ENST00000425280 P2RX2Q9UBL9 471 aa24.94■■□□□ 1.58
LDB1-202ENST00000425280 SAMHD1Q9Y3Z3 626 aaKnown RBP24.94■■□□□ 1.58
LDB1-202ENST00000425280 USP34Q70CQ2 3546 aa24.94■■□□□ 1.58
LDB1-202ENST00000425280 CCDC163A0A0D9SF12 145 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 SLC28A2O43868 658 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 RXRGP48443 463 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 GFERP55789 205 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 PRR5P85299 388 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 LASP1Q14847 261 aaKnown RBP24.93■■□□□ 1.58
LDB1-202ENST00000425280 SYPL1Q16563 259 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 SAMD14Q8IZD0 417 aaPredicted RBP24.93■■□□□ 1.58
LDB1-202ENST00000425280 CA13Q8N1Q1 262 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 ARL10Q8N8L6 244 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 KAT2AQ92830 837 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 OTUB1Q96FW1 271 aaPredicted RBP24.93■■□□□ 1.58
LDB1-202ENST00000425280 YIPF4Q9BSR8 244 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 REEP1Q9H902 201 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 ANKRA2Q9H9E1 313 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 C3orf14Q9HBI5 128 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 TMEFF2Q9UIK5 374 aaPredicted RBP24.93■■□□□ 1.58
LDB1-202ENST00000425280 RNF215Q9Y6U7 377 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 RHPN2P1A8MT19 583 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 HS6ST1O60243 411 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 PPM1FP49593 454 aaPredicted RBP24.93■■□□□ 1.58
LDB1-202ENST00000425280 BNIP3Q12983 259 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 PRTGQ2VWP7 1150 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 NUP43Q8NFH3 380 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 MIPOL1Q8TD10 442 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 GEMIN6Q8WXD5 167 aaKnown RBP24.93■■□□□ 1.58
LDB1-202ENST00000425280 C16orf58Q96GQ5 468 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 MBOAT4Q96T53 435 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 RUBCNLQ9H714 662 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 ERVMER34-1Q9H9K5 563 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 THSD1Q9NS62 852 aa24.93■■□□□ 1.58
LDB1-202ENST00000425280 TMEM247A6NEH6 219 aa24.92■■□□□ 1.58
LDB1-202ENST00000425280 SGK494L7N484 410 aa24.92■■□□□ 1.58
LDB1-202ENST00000425280 CYR61O00622 381 aa24.92■■□□□ 1.58
LDB1-202ENST00000425280 ARHGDIAP52565 204 aa24.92■■□□□ 1.58
LDB1-202ENST00000425280 DUSP7Q16829 419 aa24.92■■□□□ 1.58
LDB1-202ENST00000425280 USP53Q70EK8 1073 aa24.92■■□□□ 1.58
LDB1-202ENST00000425280 OFCC1Q8IZS5 231 aa24.92■■□□□ 1.58
LDB1-202ENST00000425280 SLC25A45Q8N413 288 aa24.92■■□□□ 1.58
LDB1-202ENST00000425280 NRBF2Q96F24 287 aa24.92■■□□□ 1.58
LDB1-202ENST00000425280 TGM7Q96PF1 710 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms