RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 SPRED3Q2MJR0 410 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 SPDYE7PQ495Y7 208 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 HES3Q5TGS1 186 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 C1orf189Q5VU69 101 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 PGM2L1Q6PCE3 622 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 TMEM64Q6YI46 380 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 SLC15A3Q8IY34 581 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 CLECL1Q8IZS7 167 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 MMP21Q8N119 569 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 LRRC25Q8N386 305 aaPredicted RBP9.71□□□□□ -0.86
MDC1-205ENST00000425072 PLPP5Q8NEB5 264 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 UCN3Q969E3 161 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 ANKRD9Q96BM1 317 aaPredicted RBP9.71□□□□□ -0.86
MDC1-205ENST00000425072 ZNF578Q96N58 590 aaPredicted RBP9.71□□□□□ -0.86
MDC1-205ENST00000425072 PTCHD1Q96NR3 888 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 CTRCQ99895 268 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 INPP5KQ9BT40 448 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 ALOXE3Q9BYJ1 711 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 FAM117AQ9C073 453 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 GLIPR2Q9H4G4 154 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 TPT1P8Q9HAU6 139 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 THUMPD1Q9NXG2 353 aaKnown RBP9.71□□□□□ -0.86
MDC1-205ENST00000425072 VAPAQ9P0L0 249 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 IFT80Q9P2H3 777 aaPredicted RBP9.71□□□□□ -0.86
MDC1-205ENST00000425072 CDV3Q9UKY7 258 aaKnown RBP9.71□□□□□ -0.86
MDC1-205ENST00000425072 PADI1Q9ULC6 663 aa9.71□□□□□ -0.86
MDC1-205ENST00000425072 KIF26BQ2KJY2 2108 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 IGLV3-12A0A075B6K2 115 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 SPAARA0A1B0GVQ0 90 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 H0YHG0 523 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 AGRPO00253 132 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 PLOD2O00469 737 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 EMC8O43402 210 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 OR10H2O60403 315 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 LDB3O75112 727 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 BCAS2O75934 225 aaPredicted RBP9.7□□□□□ -0.86
MDC1-205ENST00000425072 ATP1B1P05026 303 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 ABCB1P08183 1280 aaPredicted RBP9.7□□□□□ -0.86
MDC1-205ENST00000425072 C8orf89P0DMQ9 161 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 HSD17B1P14061 328 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 GPX2P18283 190 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 TNNI3P19429 210 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 RORAP35398 523 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 CHI3L1P36222 383 aaPredicted RBP9.7□□□□□ -0.86
MDC1-205ENST00000425072 SLC7A2P52569 658 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 PDX1P52945 283 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 SNRPNP63162 240 aaKnown RBP9.7□□□□□ -0.86
MDC1-205ENST00000425072 MAT1AQ00266 395 aaKnown RBP9.7□□□□□ -0.86
MDC1-205ENST00000425072 MAP4K2Q12851 820 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 TRAP1Q12931 704 aaKnown RBP9.7□□□□□ -0.86
MDC1-205ENST00000425072 TARDBPQ13148 414 aaKnown RBP eCLIP9.7□□□□□ -0.86
MDC1-205ENST00000425072 TP53BP2Q13625 1128 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 ERV3-1Q14264 604 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 CAPRIN1Q14444 709 aaKnown RBP9.7□□□□□ -0.86
MDC1-205ENST00000425072 PRSS53Q2L4Q9 553 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 MPEG1Q2M385 716 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 PIGGQ5H8A4 983 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 PRAMEF17Q5VTA0 474 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 MLIPQ5VWP3 458 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 ZCCHC12Q6PEW1 402 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 QSOX2Q6ZRP7 698 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 ZNF551Q7Z340 670 aaPredicted RBP9.7□□□□□ -0.86
MDC1-205ENST00000425072 C6orf120Q7Z4R8 191 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 OR4N5Q8IXE1 308 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 ST13P4Q8IZP2 240 aaPredicted RBP9.7□□□□□ -0.86
MDC1-205ENST00000425072 KIF2BQ8N4N8 673 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 METTL27Q8N6F8 245 aaPredicted RBP9.7□□□□□ -0.86
MDC1-205ENST00000425072 SLC38A9Q8NBW4 561 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 SFXN5Q8TD22 340 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 ZFP90Q8TF47 636 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 POP5Q969H6 163 aaKnown RBP9.7□□□□□ -0.86
MDC1-205ENST00000425072 TMEM125Q96AQ2 219 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 FKBP10Q96AY3 582 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 ELP4Q96EB1 424 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 FAM120BQ96EK7 910 aaKnown RBP9.7□□□□□ -0.86
MDC1-205ENST00000425072 SLC45A3Q96JT2 553 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 DGAT2Q96PD7 388 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 CSF3RQ99062 836 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 SLC35A5Q9BS91 424 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 SPATA9Q9BWV2 254 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 ULBP3Q9BZM4 244 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 SLC26A1Q9H2B4 701 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 APMAPQ9HDC9 416 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 C14orf105Q9NVL8 296 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 C5AR2Q9P296 337 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 PTGFRNQ9P2B2 879 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 ABCD2Q9UBJ2 740 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 PISDQ9UG56 409 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 NXT1Q9UKK6 140 aaKnown RBP9.7□□□□□ -0.86
MDC1-205ENST00000425072 RALYQ9UKM9 306 aaKnown RBP9.7□□□□□ -0.86
MDC1-205ENST00000425072 TMEM184BQ9Y519 407 aaPredicted RBP9.7□□□□□ -0.86
MDC1-205ENST00000425072 SNX8Q9Y5X2 465 aa9.7□□□□□ -0.86
MDC1-205ENST00000425072 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.7□□□□□ -0.86
MDC1-205ENST00000425072 FLNBO75369 2602 aaKnown RBP9.69□□□□□ -0.86
MDC1-205ENST00000425072 A0A087WV62 115 aa9.69□□□□□ -0.86
MDC1-205ENST00000425072 TRBV5-3A0A0A0MS03 114 aa9.69□□□□□ -0.86
MDC1-205ENST00000425072 DUXAA6NLW8 204 aa9.69□□□□□ -0.86
MDC1-205ENST00000425072 C9J4A7 227 aa9.69□□□□□ -0.86
MDC1-205ENST00000425072 FXYD1O00168 92 aa9.69□□□□□ -0.86
MDC1-205ENST00000425072 PCDH17O14917 1159 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms