RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 CHTF18Q8WVB6 975 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 NR4A3Q92570 626 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 SCMH1Q96GD3 660 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 FBXL20Q96IG2 436 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 GATA5Q9BWX5 397 aaPredicted RBP10.17□□□□□ -0.78
USP49-204ENST00000423567 ACPTQ9BZG2 426 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 SHCBP1LQ9BZQ2 653 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 TRIM45Q9H8W5 580 aaPredicted RBP10.17□□□□□ -0.78
USP49-204ENST00000423567 EML4Q9HC35 981 aaKnown RBP10.17□□□□□ -0.78
USP49-204ENST00000423567 TIMMDC1Q9NPL8 285 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 HPF1Q9NWY4 346 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 MYOTQ9UBF9 498 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 PCDHA9Q9Y5H5 950 aa10.17□□□□□ -0.78
USP49-204ENST00000423567 KLRC4-KLRK1H3BQV0 150 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 WWP2O00308 870 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 UBFD1O14562 309 aaKnown RBP10.16□□□□□ -0.78
USP49-204ENST00000423567 AZIN1O14977 448 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 PGRMC2O15173 223 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 CTIFO43310 598 aaKnown RBP10.16□□□□□ -0.78
USP49-204ENST00000423567 PRKNO60260 465 aaPredicted RBP10.16□□□□□ -0.78
USP49-204ENST00000423567 ERAL1O75616 437 aaKnown RBP10.16□□□□□ -0.78
USP49-204ENST00000423567 NEURL1O76050 574 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 AGFG2O95081 481 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 CPMP14384 443 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 DRD2P14416 443 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 CHN1P15882 459 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 PORP16435 677 aaPredicted RBP10.16□□□□□ -0.78
USP49-204ENST00000423567 CSNK2A2P19784 350 aaPredicted RBP10.16□□□□□ -0.78
USP49-204ENST00000423567 ALDH3A1P30838 453 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 TIA1P31483 386 aaKnown RBP eCLIP10.16□□□□□ -0.78
USP49-204ENST00000423567 GSTM5P46439 218 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 FOXA1P55317 472 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 ERVK-8P63133 956 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 BTKQ06187 659 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 MRPL49Q13405 166 aaKnown RBP10.16□□□□□ -0.78
USP49-204ENST00000423567 UBAP2LQ14157 1087 aaKnown RBP10.16□□□□□ -0.78
USP49-204ENST00000423567 HEPACAMQ14CZ8 416 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 EIF2S3LQ2VIR3 472 aaKnown RBP10.16□□□□□ -0.78
USP49-204ENST00000423567 ZNF468Q5VIY5 522 aaPredicted RBP10.16□□□□□ -0.78
USP49-204ENST00000423567 HLA-DQA1Q5Y7H0 255 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 SLC48A1Q6P1K1 146 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 OPN5Q6U736 354 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 SCIMPQ6UWF3 145 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 GALNTL5Q7Z4T8 443 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 SAMD14Q8IZD0 417 aaPredicted RBP10.16□□□□□ -0.78
USP49-204ENST00000423567 ZNF321PQ8N8H1 164 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 NUBPLQ8TB37 319 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 SLC22A8Q8TCC7 542 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 TM4SF18Q96CE8 201 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 KLHL29Q96CT2 875 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 TAAR6Q96RI8 345 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 SLX1AQ9BQ83 275 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 STMN4Q9H169 189 aaPredicted RBP10.16□□□□□ -0.78
USP49-204ENST00000423567 PFDN4Q9NQP4 134 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 GIMAP4Q9NUV9 329 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 SLC17A7Q9P2U7 560 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 ERVK-19Q9WJR5 959 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 KLF13Q9Y2Y9 288 aaPredicted RBP10.16□□□□□ -0.78
USP49-204ENST00000423567 ZNF780BQ9Y6R6 833 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 CNTRLQ7Z7A1 2325 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 SCN2AQ99250 2005 aa10.16□□□□□ -0.78
USP49-204ENST00000423567 OR6C76A6NM76 312 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 WASHC1A8K0Z3 465 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 SLC28A1O00337 649 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 RGS14O43566 566 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 NME2P1O60361 137 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 NPHS1O60500 1241 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 RSL1D1O76021 490 aaKnown RBP10.15□□□□□ -0.78
USP49-204ENST00000423567 IGKV3-11P04433 115 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 IL3P08700 152 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 ANXA4P09525 319 aaPredicted RBP10.15□□□□□ -0.78
USP49-204ENST00000423567 NT5EP21589 574 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 NME2P22392 152 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 SERPINB3P29508 390 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 SERPINB5P36952 375 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 HK2P52789 917 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 PMP22Q01453 160 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 ALDH6A1Q02252 535 aaKnown RBP10.15□□□□□ -0.78
USP49-204ENST00000423567 RBPJQ06330 500 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 FAM219BQ5XKK7 198 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 GALNT18Q6P9A2 607 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 IL20RBQ6UXL0 311 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 DGAT2L6Q6ZPD8 337 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.15□□□□□ -0.78
USP49-204ENST00000423567 POGLUT1Q8NBL1 392 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 CDC26Q8NHZ8 85 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 PPP1R14CQ8TAE6 165 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 UCN3Q969E3 161 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 APIPQ96GX9 242 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 GAL3ST4Q96RP7 486 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 RASL10BQ96S79 203 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 HES7Q9BYE0 225 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 LIN28AQ9H9Z2 209 aaKnown RBP10.15□□□□□ -0.78
USP49-204ENST00000423567 CXorf21Q9HAI6 301 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 UTS2RQ9UKP6 389 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 ENTPD4Q9Y227 616 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 DLGAP4Q9Y2H0 992 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 FIS1Q9Y3D6 152 aa10.15□□□□□ -0.78
USP49-204ENST00000423567 MYO18BQ8IUG5 2567 aa10.15□□□□□ -0.79
USP49-204ENST00000423567 NBASA2RRP1 2371 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms