RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 CUL3Q13618 768 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 CEP85LQ5SZL2 805 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 METTL2BQ6P1Q9 378 aaKnown RBP14.06□□□□□ -0.16
USB1-202ENST00000423271 LRIG3Q6UXM1 1119 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 LURAP1LQ8IV03 231 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 OR2M7Q8NG81 312 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 OR52N2Q8NGI0 321 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 TANKQ92844 425 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 ATP6V1E2Q96A05 226 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 SENP5Q96HI0 755 aaPredicted RBP14.06□□□□□ -0.16
USB1-202ENST00000423271 DDX31Q9H8H2 851 aaKnown RBP14.06□□□□□ -0.16
USB1-202ENST00000423271 LYARQ9NX58 379 aaKnown RBP14.06□□□□□ -0.16
USB1-202ENST00000423271 FBN2P35556 2912 aa14.06□□□□□ -0.16
USB1-202ENST00000423271 APCP25054 2843 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 A0A1B0GTL3 188 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 A0A1W2PS29 197 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 FAM166BA8MTA8 275 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 FOXE1O00358 373 aaPredicted RBP14.05□□□□□ -0.16
USB1-202ENST00000423271 DLX3O60479 287 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 PLIN3O60664 434 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 RPS17P08708 135 aaKnown RBP14.05□□□□□ -0.16
USB1-202ENST00000423271 FAM58BPP0C7Q3 252 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 ALOX15P16050 662 aaPredicted RBP14.05□□□□□ -0.16
USB1-202ENST00000423271 TAC1P20366 129 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 HTR1EP28566 365 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 TLX1P31314 330 aaPredicted RBP14.05□□□□□ -0.16
USB1-202ENST00000423271 BUD31P41223 144 aaPredicted RBP14.05□□□□□ -0.16
USB1-202ENST00000423271 ARFIP1P53367 373 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 ASPHQ12797 758 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 CYP20A1Q6UW02 462 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 RTL4Q6ZR62 310 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 CD163Q86VB7 1156 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 NUDT13Q86X67 352 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 TICAM1Q8IUC6 712 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 BANPQ8N9N5 519 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 OR5L2Q8NGL0 311 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 APOPT1Q96IL0 206 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 DMRTA2Q96SC8 542 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 CNPPD1Q9BV87 410 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 SEMA4BQ9NPR2 832 aaPredicted RBP14.05□□□□□ -0.16
USB1-202ENST00000423271 MKS1Q9NXB0 559 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 GRID1Q9ULK0 1009 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 ADGRG4Q8IZF6 3080 aa14.05□□□□□ -0.16
USB1-202ENST00000423271 PPP6CO00743 305 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 PRRG2O14669 202 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 RGS16O15492 202 aaPredicted RBP14.04□□□□□ -0.16
USB1-202ENST00000423271 SPAG7O75391 227 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 PDE9AO76083 593 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 NADKO95544 446 aaPredicted RBP14.04□□□□□ -0.16
USB1-202ENST00000423271 GPR75O95800 540 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 TPOP07202 933 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 CCL3P10147 92 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 CREB1P16220 341 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 TSPAN8P19075 237 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 ATP5F1P24539 256 aaPredicted RBP14.04□□□□□ -0.16
USB1-202ENST00000423271 PTGS2P35354 604 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 SMSP52788 366 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 PPIAP62937 165 aaKnown RBP14.04□□□□□ -0.16
USB1-202ENST00000423271 HERVK_113P63132 956 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 ERVK-8P63133 956 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 PLGLB1Q02325 96 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 ZNF630Q2M218 657 aaPredicted RBP14.04□□□□□ -0.16
USB1-202ENST00000423271 CCDC153Q494R4 210 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 FRG2Q64ET8 278 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 XKRXQ6PP77 449 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 ZYG11AQ6WRX3 759 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 ST13P4Q8IZP2 240 aaPredicted RBP14.04□□□□□ -0.16
USB1-202ENST00000423271 FAM57AQ8TBR7 257 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 ZNF483Q8TF39 744 aaPredicted RBP14.04□□□□□ -0.16
USB1-202ENST00000423271 RBM18Q96H35 190 aaKnown RBP14.04□□□□□ -0.16
USB1-202ENST00000423271 FBXL20Q96IG2 436 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 TMEM237Q96Q45 408 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 FRG2BQ96QU4 278 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 SERPINI1Q99574 410 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 NTMT1Q9BV86 223 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 ERVK-6Q9BXR3 956 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 TTTY12Q9BZ98 90 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 DEFB127Q9H1M4 99 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 CENPHQ9H3R5 247 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 PLSCR2Q9NRY7 297 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 TEX10Q9NXF1 929 aaPredicted RBP14.04□□□□□ -0.16
USB1-202ENST00000423271 PSD3Q9NYI0 1048 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 PPT2Q9UMR5 302 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 ERVK-19Q9WJR5 959 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 HRH3Q9Y5N1 445 aa14.04□□□□□ -0.16
USB1-202ENST00000423271 E9PLN8 166 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 G3V2L1 256 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 C19orf84I3L1E1 186 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 OR10H2O60403 315 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 GLSO94925 669 aaPredicted RBP14.03□□□□□ -0.16
USB1-202ENST00000423271 SEMA3DO95025 777 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 CLPSP04118 112 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 SNRPB2P08579 225 aaKnown RBP14.03□□□□□ -0.16
USB1-202ENST00000423271 MYL2P10916 166 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 AGAP20933 346 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 DNASE1L1P49184 302 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 CDH13P55290 713 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 ZNF267Q14586 743 aaPredicted RBP14.03□□□□□ -0.16
USB1-202ENST00000423271 CASP8Q14790 479 aa14.03□□□□□ -0.16
USB1-202ENST00000423271 MPEG1Q2M385 716 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms