RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 TMED5Q9Y3A6 229 aa14.69□□□□□ -0.06
BRAT1-202ENST00000421712 A0A1W2PS29 197 aa14.68□□□□□ -0.06
BRAT1-202ENST00000421712 NPIPB8E9PQR5 432 aa14.68□□□□□ -0.06
BRAT1-202ENST00000421712 ZFAND5O76080 213 aa14.68□□□□□ -0.06
BRAT1-202ENST00000421712 CPMP14384 443 aa14.68□□□□□ -0.06
BRAT1-202ENST00000421712 ERVK-8P63133 956 aa14.68□□□□□ -0.06
BRAT1-202ENST00000421712 NADK2Q4G0N4 442 aa14.68□□□□□ -0.06
BRAT1-202ENST00000421712 XKR7Q5GH72 579 aa14.68□□□□□ -0.06
BRAT1-202ENST00000421712 ACER2Q5QJU3 275 aa14.68□□□□□ -0.06
BRAT1-202ENST00000421712 H3F3CQ6NXT2 135 aa14.68□□□□□ -0.06
BRAT1-202ENST00000421712 HSDL2Q6YN16 418 aa14.68□□□□□ -0.06
BRAT1-202ENST00000421712 DGAT2L6Q6ZPD8 337 aa14.68□□□□□ -0.06
BRAT1-202ENST00000421712 PRICKLE2Q7Z3G6 844 aa14.68□□□□□ -0.06
BRAT1-202ENST00000421712 RBMXL3Q8N7X1 1067 aaKnown RBP14.68□□□□□ -0.06
BRAT1-202ENST00000421712 APCDD1LQ8NCL9 501 aa14.68□□□□□ -0.06
BRAT1-202ENST00000421712 GFM2Q969S9 779 aaKnown RBP14.68□□□□□ -0.06
BRAT1-202ENST00000421712 TSSK3Q96PN8 268 aa14.68□□□□□ -0.06
BRAT1-202ENST00000421712 BBS4Q96RK4 519 aa14.68□□□□□ -0.06
BRAT1-202ENST00000421712 NUF2Q9BZD4 464 aa14.68□□□□□ -0.06
BRAT1-202ENST00000421712 BRINP2Q9C0B6 783 aa14.68□□□□□ -0.06
BRAT1-202ENST00000421712 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.68□□□□□ -0.06
BRAT1-202ENST00000421712 MYNNQ9NPC7 610 aa14.68□□□□□ -0.06
BRAT1-202ENST00000421712 SLAMF7Q9NQ25 335 aa14.68□□□□□ -0.06
BRAT1-202ENST00000421712 LUZP4Q9P127 313 aa14.68□□□□□ -0.06
BRAT1-202ENST00000421712 MARCOQ9UEW3 520 aaPredicted RBP14.68□□□□□ -0.06
BRAT1-202ENST00000421712 BAIAP2L1Q9UHR4 511 aa14.68□□□□□ -0.06
BRAT1-202ENST00000421712 ERVK-19Q9WJR5 959 aa14.68□□□□□ -0.06
BRAT1-202ENST00000421712 ATRXP46100 2492 aa14.68□□□□□ -0.06
BRAT1-202ENST00000421712 CNTRLQ7Z7A1 2325 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 B8ZZF3 427 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 FCHO1O14526 889 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 AKAP10O43572 662 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 SNNO75324 88 aaPredicted RBP14.67□□□□□ -0.06
BRAT1-202ENST00000421712 LRATO95237 230 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 DDAH2O95865 285 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 WDPCPO95876 746 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 JUNP05412 331 aaKnown RBP14.67□□□□□ -0.06
BRAT1-202ENST00000421712 DDCP20711 480 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 TACR1P25103 407 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 SOX11P35716 441 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 CD97P48960 835 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 ST13P50502 369 aaKnown RBP14.67□□□□□ -0.06
BRAT1-202ENST00000421712 OC90Q02509 493 aaPredicted RBP14.67□□□□□ -0.06
BRAT1-202ENST00000421712 FAM71E1Q6IPT2 247 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 IGFL3Q6UXB1 125 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 IKBIPQ70UQ0 350 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 TICAM1Q8IUC6 712 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 CCDC116Q8IYX3 515 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 SAMD14Q8IZD0 417 aaPredicted RBP14.67□□□□□ -0.06
BRAT1-202ENST00000421712 BEST3Q8N1M1 668 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 LIX1Q8N485 282 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 ZNF321PQ8N8H1 164 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 CLHC1Q8NHS4 586 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 EGLN2Q96KS0 407 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 C1orf50Q9BV19 199 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 LIN28AQ9H9Z2 209 aaKnown RBP14.67□□□□□ -0.06
BRAT1-202ENST00000421712 SLC35C2Q9NQQ7 365 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.67□□□□□ -0.06
BRAT1-202ENST00000421712 HAO1Q9UJM8 370 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 ANAPC2Q9UJX6 822 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 PPIEQ9UNP9 301 aaKnown RBP14.67□□□□□ -0.06
BRAT1-202ENST00000421712 EIF3LQ9Y262 564 aaKnown RBP14.67□□□□□ -0.06
BRAT1-202ENST00000421712 B3GNT3Q9Y2A9 372 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 IGSF10Q6WRI0 2623 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 BAHCC1Q9P281 2608 aa14.67□□□□□ -0.06
BRAT1-202ENST00000421712 HRKO00198 91 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 KLF11O14901 512 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 MAN1A2O60476 641 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 C1QL1O75973 258 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 BCKDHAP12694 445 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 SDC1P18827 310 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 GALNSP34059 522 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 ASMTP46597 345 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 GPR143P51810 404 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 MAD2L1Q13257 205 aaPredicted RBP14.66□□□□□ -0.06
BRAT1-202ENST00000421712 C6orf136Q5SQH8 315 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 IL23RQ5VWK5 629 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 IGFL2Q6UWQ7 119 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 RNF111Q6ZNA4 994 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 GALNT12Q8IXK2 581 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 LRRC25Q8N386 305 aaPredicted RBP14.66□□□□□ -0.06
BRAT1-202ENST00000421712 CATSPER1Q8NEC5 780 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 ADCY4Q8NFM4 1077 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 OR5L2Q8NGL0 311 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 SUN3Q8TAQ9 357 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 ZNF721Q8TF20 911 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 HAS2Q92819 552 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 CNRIP1Q96F85 164 aaPredicted RBP14.66□□□□□ -0.06
BRAT1-202ENST00000421712 FBXL20Q96IG2 436 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 UTP23Q9BRU9 249 aaKnown RBP14.66□□□□□ -0.06
BRAT1-202ENST00000421712 AKTIPQ9H8T0 292 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 CXorf21Q9HAI6 301 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 ANKRD10Q9NXR5 420 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 EHD3Q9NZN3 535 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 ZNF223Q9UK11 482 aaPredicted RBP14.66□□□□□ -0.06
BRAT1-202ENST00000421712 CSAG2Q9Y5P2 127 aa14.66□□□□□ -0.06
BRAT1-202ENST00000421712 TRPC5OSA6NMA1 111 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 TTLL8A6PVC2 850 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 GABRR3A8MPY1 467 aa14.65□□□□□ -0.06
BRAT1-202ENST00000421712 SLCO1B7G3V0H7 640 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms