RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 ZNF112Q9UJU3 913 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 PTBP2Q9UKA9 531 aaKnown RBP2.46□□□□□ -2.02
VPS41-206ENST00000418457 BLOC1S6Q9UL45 172 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 DNPEPQ9ULA0 475 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 PSMD13Q9UNM6 376 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 AGTPBP1Q9UPW5 1226 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 ZNF510Q9Y2H8 683 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 PLLPQ9Y342 182 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 SH3GLB1Q9Y371 365 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 GRIP1Q9Y3R0 1128 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 HBS1LQ9Y450 684 aaKnown RBP2.46□□□□□ -2.02
VPS41-206ENST00000418457 TTLL3Q9Y4R7 772 aa2.46□□□□□ -2.02
VPS41-206ENST00000418457 SF3B1O75533 1304 aaKnown RBP eCLIP2.45□□□□□ -2.02
VPS41-206ENST00000418457 BTAF1O14981 1849 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 A0A0B4J293 547 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 A0A0J9YVX5 310 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 A0A1B0GVG6 124 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 TCRBV9S1A1TA0A576 114 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 SH3PXD2BA1X283 911 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 CCDC160A6NGH7 325 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 HEPACAM2A8MVW5 462 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 KPNA7A9QM74 516 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 ZNF487B1APH4 448 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 TMEM114B3SHH9 223 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 TRIM49D1C9J1S8 452 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 KBTBD13C9JR72 458 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 E9PBE3 544 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 SLCO1B7G3V0H7 640 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 TXNDC9O14530 226 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 MED7O43513 233 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 XRCC3O43542 346 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 TIMM44O43615 452 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 CHMP2AO43633 222 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 EXTL3O43909 919 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 TSPAN1O60635 241 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 ATP6V1G1O75348 118 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 E2F6O75461 281 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 TRMUO75648 421 aaKnown RBP2.45□□□□□ -2.02
VPS41-206ENST00000418457 STAM2O75886 525 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 NDUFB10O96000 172 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 IFNB1P01574 187 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 PIGRP01833 764 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 APOEP02649 317 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 SERPINE1P05121 402 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 ADRB2P07550 413 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 CD48P09326 243 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 SMIM18P0DKX4 95 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 THRAP10827 490 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 ACP2P11117 423 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 FGF5P12034 268 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 MLNP12872 115 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 PSMC3P17980 439 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 TPSB2P20231 275 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 MSH3P20585 1137 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 IL11P20809 199 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 BGNP21810 368 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 ANOS1P23352 680 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 DNASE1P24855 282 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 DNAJB1P25685 340 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 EPHA2P29317 976 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 HMOX2P30519 316 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 SSTR1P30872 391 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 YWHABP31946 246 aaKnown RBP2.45□□□□□ -2.02
VPS41-206ENST00000418457 CDH5P33151 784 aaPredicted RBP2.45□□□□□ -2.02
VPS41-206ENST00000418457 RPL22P35268 128 aaKnown RBP2.45□□□□□ -2.02
VPS41-206ENST00000418457 MAGEA6P43360 314 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 CD151P48509 253 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 CDK9P50750 372 aaKnown RBP2.45□□□□□ -2.02
VPS41-206ENST00000418457 THOP1P52888 689 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 AQP5P55064 265 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 AQP4P55087 323 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 MTTPP55157 894 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 CDH13P55290 713 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 PEX3P56589 373 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 MYL6P60660 151 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 YWHAGP61981 247 aaKnown RBP eCLIP2.45□□□□□ -2.02
VPS41-206ENST00000418457 PSMC5P62195 406 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 ESRRGP62508 458 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 BASP1P80723 227 aaKnown RBP2.45□□□□□ -2.02
VPS41-206ENST00000418457 OTUD4Q01804 1114 aaKnown RBP2.45□□□□□ -2.02
VPS41-206ENST00000418457 ROR1Q01973 937 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 KDSRQ06136 332 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 PPIDQ08752 370 aaKnown RBP2.45□□□□□ -2.02
VPS41-206ENST00000418457 BST1Q10588 318 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 PNRC1Q12796 327 aaPredicted RBP2.45□□□□□ -2.02
VPS41-206ENST00000418457 CBX3Q13185 183 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 CUL2Q13617 745 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 APOFQ13790 326 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 DPYSL3Q14195 570 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 KCNJ11Q14654 390 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 KCTD2Q14681 263 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 RFTN1Q14699 578 aaPredicted RBP2.45□□□□□ -2.02
VPS41-206ENST00000418457 FASTKD3Q14CZ7 662 aaKnown RBP2.45□□□□□ -2.02
VPS41-206ENST00000418457 HERC3Q15034 1050 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 TRIP10Q15642 601 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 TPSAB1Q15661 275 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 CHI3L2Q15782 390 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 KBTBD12Q3ZCT8 623 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 CCDC153Q494R4 210 aa2.45□□□□□ -2.02
VPS41-206ENST00000418457 CRY2Q49AN0 593 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms