RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 ILKQ13418 452 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 BAK1Q16611 211 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 LRRC26Q2I0M4 334 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 ARHGAP15Q53QZ3 475 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 CASP12Q6UXS9 341 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 IKBIPQ70UQ0 350 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 SPRED2Q7Z698 418 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 C17orf64Q86WR6 236 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 KRT78Q8N1N4 520 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 OR2L2Q8NH16 312 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 TMEM80Q96HE8 168 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 TSSK6Q9BXA6 273 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 ZCCHC2Q9C0B9 1178 aaKnown RBP13.72□□□□□ -0.21
HDAC9-208ENST00000417496 HOXD1Q9GZZ0 328 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 QRSL1Q9H0R6 528 aaKnown RBP13.72□□□□□ -0.21
HDAC9-208ENST00000417496 TCF20Q9UGU0 1960 aaKnown RBP13.72□□□□□ -0.21
HDAC9-208ENST00000417496 PDZK1P1A8MUH7 402 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 A8MV72 311 aaPredicted RBP13.72□□□□□ -0.21
HDAC9-208ENST00000417496 FKTNO75072 461 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 GNRH1P01148 92 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 CCL5P13501 91 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 EPCAMP16422 314 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 CSTF2P33240 577 aaKnown RBP eCLIP13.72□□□□□ -0.21
HDAC9-208ENST00000417496 BMPR1AP36894 532 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 CCT3P49368 545 aaKnown RBP13.72□□□□□ -0.21
HDAC9-208ENST00000417496 TIMM50Q3ZCQ8 353 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 PODNL1Q6PEZ8 512 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 OR5P2Q8WZ92 322 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 RAD51AP1Q96B01 352 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 LRIG1Q96JA1 1093 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 SMURF1Q9HCE7 757 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 A4GALTQ9NPC4 353 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 FZD3Q9NPG1 666 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 TIGARQ9NQ88 270 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 WDR70Q9NW82 654 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 TRPC4Q9UBN4 977 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 YARS2Q9Y2Z4 477 aaKnown RBP13.72□□□□□ -0.21
HDAC9-208ENST00000417496 VCANP13611 3396 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 REV3LO60673 3130 aa13.72□□□□□ -0.21
HDAC9-208ENST00000417496 LATO43561 262 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 DYRK3O43781 588 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 LCMT2O60294 686 aaKnown RBP13.71□□□□□ -0.21
HDAC9-208ENST00000417496 CCNKO75909 580 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 TP53P04637 393 aaPredicted RBP13.71□□□□□ -0.21
HDAC9-208ENST00000417496 CLEC2LP0C7M8 214 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 ADRB3P13945 408 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 CEBPBP17676 345 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 KCNJ5P48544 419 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 COPZ1P61923 177 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 ZNF750Q32MQ0 723 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 FNDC3BQ53EP0 1204 aaKnown RBP13.71□□□□□ -0.21
HDAC9-208ENST00000417496 C9orf64Q5T6V5 341 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 SLX4IPQ5VYV7 408 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 MMAAQ8IVH4 418 aaKnown RBP13.71□□□□□ -0.21
HDAC9-208ENST00000417496 ASB15Q8WXK1 588 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 SMPDL3AQ92484 453 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 UBE2E3Q969T4 207 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 OR2A14Q96R47 310 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 ENOPH1Q9UHY7 261 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 ARRDC5A6NEK1 342 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 A6NL46 340 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 OR1F1O43749 312 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 ADH5P11766 374 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 PSMA1P25786 263 aaKnown RBP13.71□□□□□ -0.21
HDAC9-208ENST00000417496 PCBP4P57723 403 aaKnown RBP13.71□□□□□ -0.21
HDAC9-208ENST00000417496 DEFA1P59665 94 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 DEFA3P59666 94 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 SNRPGP62308 76 aaKnown RBP13.71□□□□□ -0.21
HDAC9-208ENST00000417496 IFITM2Q01629 132 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 HEPACAMQ14CZ8 416 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 TAB1Q15750 504 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 FLYWCH1Q4VC44 716 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 ACSM5Q6NUN0 579 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 ADCK2Q7Z695 626 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 ZER1Q7Z7L7 766 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 SETD7Q8WTS6 366 aaKnown RBP13.71□□□□□ -0.21
HDAC9-208ENST00000417496 RSPRY1Q96DX4 576 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 ZNF354BQ96LW1 612 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 MS4A8Q9BY19 250 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 OR51I1Q9H343 314 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 DPEP2Q9H4A9 486 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 AHSPQ9NZD4 102 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 A4GNTQ9UNA3 340 aa13.71□□□□□ -0.21
HDAC9-208ENST00000417496 CAPN5O15484 640 aaPredicted RBP13.7□□□□□ -0.22
HDAC9-208ENST00000417496 APOA1P02647 267 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 TCEA1P23193 301 aaKnown RBP13.7□□□□□ -0.22
HDAC9-208ENST00000417496 MMP11P24347 488 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 ETV5P41161 510 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 ETV6P41212 452 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 ETV1P50549 477 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 RHAGQ02094 409 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 GPR19Q15760 415 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 RSBN1Q5VWQ0 802 aaPredicted RBP13.7□□□□□ -0.22
HDAC9-208ENST00000417496 LCTLQ6UWM7 567 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 TMC5Q6UXY8 1006 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 UBE3DQ7Z6J8 389 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 AMZ2Q86W34 360 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 GATAD2AQ86YP4 633 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 PHC2Q8IXK0 858 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 TOX2Q96NM4 488 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms