RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 CHCHD2Q9Y6H1 151 aaPredicted RBP12.6□□□□□ -0.39
SSB-204ENST00000417292 CHD3Q12873 2000 aaKnown RBP12.6□□□□□ -0.39
SSB-204ENST00000417292 DOCK7Q96N67 2140 aa12.59□□□□□ -0.39
SSB-204ENST00000417292 LRIT2A6NDA9 550 aa12.59□□□□□ -0.39
SSB-204ENST00000417292 CD8B2A6NJW9 211 aa12.59□□□□□ -0.39
SSB-204ENST00000417292 SIAH2O43255 324 aa12.59□□□□□ -0.39
SSB-204ENST00000417292 B3GALT2O43825 422 aa12.59□□□□□ -0.39
SSB-204ENST00000417292 TBX6O95947 436 aaPredicted RBP12.59□□□□□ -0.39
SSB-204ENST00000417292 IL18BPO95998 194 aa12.59□□□□□ -0.39
SSB-204ENST00000417292 ZNF37AP17032 561 aaPredicted RBP12.59□□□□□ -0.39
SSB-204ENST00000417292 TNNI3P19429 210 aa12.59□□□□□ -0.39
SSB-204ENST00000417292 LIM2P55344 173 aa12.59□□□□□ -0.39
SSB-204ENST00000417292 AP1S2P56377 157 aa12.59□□□□□ -0.39
SSB-204ENST00000417292 STXBP1P61764 594 aaKnown RBP12.59□□□□□ -0.39
SSB-204ENST00000417292 KRTAP1-1Q07627 177 aa12.59□□□□□ -0.39
SSB-204ENST00000417292 FOXF2Q12947 444 aa12.59□□□□□ -0.39
SSB-204ENST00000417292 THOC6Q86W42 341 aaKnown RBP12.59□□□□□ -0.39
SSB-204ENST00000417292 C9orf40Q8IXQ3 194 aa12.59□□□□□ -0.39
SSB-204ENST00000417292 C9orf106Q8NAJ2 232 aa12.59□□□□□ -0.39
SSB-204ENST00000417292 OR10G3Q8NGC4 313 aa12.59□□□□□ -0.39
SSB-204ENST00000417292 PPP1R14CQ8TAE6 165 aa12.59□□□□□ -0.39
SSB-204ENST00000417292 ISL2Q96A47 359 aa12.59□□□□□ -0.39
SSB-204ENST00000417292 SPACA9Q96E40 222 aaPredicted RBP12.59□□□□□ -0.39
SSB-204ENST00000417292 TRIB1Q96RU8 372 aa12.59□□□□□ -0.39
SSB-204ENST00000417292 NSMCE4AQ9NXX6 385 aa12.59□□□□□ -0.39
SSB-204ENST00000417292 TXNDC16Q9P2K2 825 aa12.59□□□□□ -0.39
SSB-204ENST00000417292 DAPP1Q9UN19 280 aa12.59□□□□□ -0.39
SSB-204ENST00000417292 LDB3O75112 727 aa12.58□□□□□ -0.4
SSB-204ENST00000417292 CNOT4O95628 575 aaKnown RBP12.58□□□□□ -0.4
SSB-204ENST00000417292 GSTA2P09210 222 aa12.58□□□□□ -0.4
SSB-204ENST00000417292 BMP7P18075 431 aa12.58□□□□□ -0.4
SSB-204ENST00000417292 GDF1P27539 372 aa12.58□□□□□ -0.4
SSB-204ENST00000417292 CERS1P27544 350 aa12.58□□□□□ -0.4
SSB-204ENST00000417292 PLA2G16P53816 162 aa12.58□□□□□ -0.4
SSB-204ENST00000417292 SLC12A2P55011 1212 aa12.58□□□□□ -0.4
SSB-204ENST00000417292 ID2Q02363 134 aa12.58□□□□□ -0.4
SSB-204ENST00000417292 STX4Q12846 297 aa12.58□□□□□ -0.4
SSB-204ENST00000417292 DCST1Q5T197 706 aa12.58□□□□□ -0.4
SSB-204ENST00000417292 VASNQ6EMK4 673 aa12.58□□□□□ -0.4
SSB-204ENST00000417292 LUZP2Q86TE4 346 aa12.58□□□□□ -0.4
SSB-204ENST00000417292 PM20D2Q8IYS1 436 aa12.58□□□□□ -0.4
SSB-204ENST00000417292 NUBPLQ8TB37 319 aa12.58□□□□□ -0.4
SSB-204ENST00000417292 ATL1Q8WXF7 558 aa12.58□□□□□ -0.4
SSB-204ENST00000417292 RBBP8Q99708 897 aa12.58□□□□□ -0.4
SSB-204ENST00000417292 CPNE1Q99829 537 aa12.58□□□□□ -0.4
SSB-204ENST00000417292 NINJ2Q9NZG7 142 aa12.58□□□□□ -0.4
SSB-204ENST00000417292 C6orf203Q9P0P8 240 aaPredicted RBP12.58□□□□□ -0.4
SSB-204ENST00000417292 CNOT11Q9UKZ1 510 aaKnown RBP12.58□□□□□ -0.4
SSB-204ENST00000417292 CAMK2AQ9UQM7 478 aa12.58□□□□□ -0.4
SSB-204ENST00000417292 EIF3LQ9Y262 564 aaKnown RBP12.58□□□□□ -0.4
SSB-204ENST00000417292 SLC22A14Q9Y267 594 aa12.58□□□□□ -0.4
SSB-204ENST00000417292 SLC6A5Q9Y345 797 aa12.58□□□□□ -0.4
SSB-204ENST00000417292 DYRK1BQ9Y463 629 aa12.58□□□□□ -0.4
SSB-204ENST00000417292 SYNDIG1LA6NDD5 238 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 PABPN1LA6NDY0 278 aaKnown RBP12.57□□□□□ -0.4
SSB-204ENST00000417292 HRKO00198 91 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 CASKO14936 926 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 TRIM3O75382 744 aaPredicted RBP12.57□□□□□ -0.4
SSB-204ENST00000417292 IGKV3-11P04433 115 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 RHOXF2BP0C7M4 288 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 ECHS1P30084 290 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 STX2P32856 288 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 SOX18P35713 384 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 GP5P40197 560 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 POU4F1Q01851 419 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 TBL3Q12788 808 aaKnown RBP12.57□□□□□ -0.4
SSB-204ENST00000417292 TSNQ15631 228 aaKnown RBP12.57□□□□□ -0.4
SSB-204ENST00000417292 ACKR1Q16570 336 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 C18orf21Q32NC0 220 aaPredicted RBP12.57□□□□□ -0.4
SSB-204ENST00000417292 SBSNQ6UWP8 590 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 CYS1Q717R9 158 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 NKAPQ8N5F7 415 aaKnown RBP12.57□□□□□ -0.4
SSB-204ENST00000417292 FAM13CQ8NE31 585 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 UHMK1Q8TAS1 419 aaKnown RBP12.57□□□□□ -0.4
SSB-204ENST00000417292 SLC22A8Q8TCC7 542 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 WDYHV1Q96HA8 205 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 PDLIM5Q96HC4 596 aaKnown RBP12.57□□□□□ -0.4
SSB-204ENST00000417292 SENP5Q96HI0 755 aaPredicted RBP12.57□□□□□ -0.4
SSB-204ENST00000417292 SERINC2Q96SA4 455 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 GPR22Q99680 433 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 CCL19Q99731 98 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 RHOXF2Q9BQY4 288 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 DOHHQ9BU89 302 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 PHACTR1Q9C0D0 580 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 UBQLN3Q9H347 655 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 CNIH4Q9P003 139 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 COPS7AQ9UBW8 275 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 TESMINQ9Y4I5 508 aa12.57□□□□□ -0.4
SSB-204ENST00000417292 NCF1BA6NI72 391 aaPredicted RBP12.56□□□□□ -0.4
SSB-204ENST00000417292 NCF1CA8MVU1 366 aaPredicted RBP12.56□□□□□ -0.4
SSB-204ENST00000417292 DEFB108AA8MXU0 73 aa12.56□□□□□ -0.4
SSB-204ENST00000417292 ERN1O75460 977 aaKnown RBP12.56□□□□□ -0.4
SSB-204ENST00000417292 TRAPPC6AO75865 159 aa12.56□□□□□ -0.4
SSB-204ENST00000417292 ACSL3O95573 720 aa12.56□□□□□ -0.4
SSB-204ENST00000417292 HPNP05981 417 aa12.56□□□□□ -0.4
SSB-204ENST00000417292 FBXO45P0C2W1 286 aa12.56□□□□□ -0.4
SSB-204ENST00000417292 CCDC166P0CW27 439 aa12.56□□□□□ -0.4
SSB-204ENST00000417292 TMIGD3P0DMS9 266 aaPredicted RBP12.56□□□□□ -0.4
SSB-204ENST00000417292 NCF1P14598 390 aaPredicted RBP12.56□□□□□ -0.4
SSB-204ENST00000417292 SLCO1A2P46721 670 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms