RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 GTF2H2Q13888 395 aa20.09■□□□□ 0.81
ACTB-203ENST00000417101 PCBP2Q15366 365 aaKnown RBP eCLIP20.09■□□□□ 0.811e-12■■■□□ 17.1
ACTB-203ENST00000417101 MRM1Q6IN84 353 aaKnown RBP20.09■□□□□ 0.81
ACTB-203ENST00000417101 GTF2H2CQ6P1K8 395 aa20.09■□□□□ 0.81
ACTB-203ENST00000417101 KLC3Q6P597 504 aa20.09■□□□□ 0.81
ACTB-203ENST00000417101 CYP20A1Q6UW02 462 aa20.09■□□□□ 0.81
ACTB-203ENST00000417101 RNF111Q6ZNA4 994 aa20.09■□□□□ 0.81
ACTB-203ENST00000417101 SLC29A4Q7RTT9 530 aa20.09■□□□□ 0.81
ACTB-203ENST00000417101 GOLGA7Q7Z5G4 137 aa20.09■□□□□ 0.81
ACTB-203ENST00000417101 SLC15A4Q8N697 577 aa20.09■□□□□ 0.81
ACTB-203ENST00000417101 FAM13CQ8NE31 585 aa20.09■□□□□ 0.81
ACTB-203ENST00000417101 PELOQ9BRX2 385 aaKnown RBP20.09■□□□□ 0.81
ACTB-203ENST00000417101 EXO5Q9H790 373 aa20.09■□□□□ 0.81
ACTB-203ENST00000417101 FAM215AQ9Y5M1 114 aa20.09■□□□□ 0.81
ACTB-203ENST00000417101 PHF3Q92576 2039 aaKnown RBP20.09■□□□□ 0.81
ACTB-203ENST00000417101 SPG11Q96JI7 2443 aa20.08■□□□□ 0.81
ACTB-203ENST00000417101 A0A0A6YYD5 115 aa20.08■□□□□ 0.81
ACTB-203ENST00000417101 FOXO6A8MYZ6 492 aa20.08■□□□□ 0.81
ACTB-203ENST00000417101 UGDHO60701 494 aa20.08■□□□□ 0.81
ACTB-203ENST00000417101 GLI4P10075 376 aa20.08■□□□□ 0.81
ACTB-203ENST00000417101 PIK3CGP48736 1102 aa20.08■□□□□ 0.81
ACTB-203ENST00000417101 NEK2P51955 445 aa20.08■□□□□ 0.81
ACTB-203ENST00000417101 CUL3Q13618 768 aa20.08■□□□□ 0.81
ACTB-203ENST00000417101 SPRED3Q2MJR0 410 aa20.08■□□□□ 0.81
ACTB-203ENST00000417101 RTL6Q6ICC9 239 aa20.08■□□□□ 0.81
ACTB-203ENST00000417101 OR10G3Q8NGC4 313 aa20.08■□□□□ 0.81
ACTB-203ENST00000417101 RIT1Q92963 219 aa20.08■□□□□ 0.81
ACTB-203ENST00000417101 GPR78Q96P69 363 aa20.08■□□□□ 0.81
ACTB-203ENST00000417101 WWTR1Q9GZV5 400 aa20.08■□□□□ 0.81
ACTB-203ENST00000417101 DDX31Q9H8H2 851 aaKnown RBP20.08■□□□□ 0.81
ACTB-203ENST00000417101 WDR41Q9HAD4 459 aa20.08■□□□□ 0.81
ACTB-203ENST00000417101 BOKQ9UMX3 212 aaPredicted RBP20.08■□□□□ 0.81
ACTB-203ENST00000417101 TNPO3Q9Y5L0 923 aaKnown RBP20.08■□□□□ 0.81
ACTB-203ENST00000417101 HCFC1P51610 2035 aa20.07■□□□□ 0.8
ACTB-203ENST00000417101 TRGV5A0A0B4J1U4 118 aa20.07■□□□□ 0.8
ACTB-203ENST00000417101 HCN1O60741 890 aa20.07■□□□□ 0.8
ACTB-203ENST00000417101 AIFM1O95831 613 aa20.07■□□□□ 0.8
ACTB-203ENST00000417101 GBAP04062 536 aa20.07■□□□□ 0.8
ACTB-203ENST00000417101 ALDOAP04075 364 aaKnown RBP20.07■□□□□ 0.8
ACTB-203ENST00000417101 RFPL3SP0C7P2 107 aa20.07■□□□□ 0.8
ACTB-203ENST00000417101 SERPINB3P29508 390 aa20.07■□□□□ 0.8
ACTB-203ENST00000417101 TYK2P29597 1187 aa20.07■□□□□ 0.8
ACTB-203ENST00000417101 SERPINB8P50452 374 aa20.07■□□□□ 0.8
ACTB-203ENST00000417101 SLC37A1P57057 533 aa20.07■□□□□ 0.8
ACTB-203ENST00000417101 WLSQ5T9L3 541 aa20.07■□□□□ 0.8
ACTB-203ENST00000417101 ZNF572Q7Z3I7 529 aaPredicted RBP20.07■□□□□ 0.8
ACTB-203ENST00000417101 DMRTC2Q8IXT2 367 aaPredicted RBP20.07■□□□□ 0.8
ACTB-203ENST00000417101 FBXW8Q8N3Y1 598 aa20.07■□□□□ 0.8
ACTB-203ENST00000417101 L3MBTL4Q8NA19 623 aa20.07■□□□□ 0.8
ACTB-203ENST00000417101 WDR20Q8TBZ3 569 aa20.07■□□□□ 0.8
ACTB-203ENST00000417101 UCN3Q969E3 161 aa20.07■□□□□ 0.8
ACTB-203ENST00000417101 SARAFQ96BY9 339 aa20.07■□□□□ 0.8
ACTB-203ENST00000417101 VPS11Q9H270 941 aa20.07■□□□□ 0.8
ACTB-203ENST00000417101 ZNF703Q9H7S9 590 aaPredicted RBP20.07■□□□□ 0.8
ACTB-203ENST00000417101 ZFP64Q9NPA5 681 aa20.07■□□□□ 0.8
ACTB-203ENST00000417101 ZDHHC18Q9NUE0 388 aa20.07■□□□□ 0.8
ACTB-203ENST00000417101 ALKBH4Q9NXW9 302 aa20.07■□□□□ 0.8
ACTB-203ENST00000417101 CNIH4Q9P003 139 aa20.07■□□□□ 0.8
ACTB-203ENST00000417101 WDR1O75083 606 aa20.06■□□□□ 0.8
ACTB-203ENST00000417101 LRATO95237 230 aa20.06■□□□□ 0.8
ACTB-203ENST00000417101 HOXD4P09016 255 aaPredicted RBP20.06■□□□□ 0.8
ACTB-203ENST00000417101 FBXO45P0C2W1 286 aa20.06■□□□□ 0.8
ACTB-203ENST00000417101 ENDOUP21128 410 aaKnown RBP20.06■□□□□ 0.8
ACTB-203ENST00000417101 ARL1P40616 181 aaPredicted RBP20.06■□□□□ 0.8
ACTB-203ENST00000417101 TBL3Q12788 808 aaKnown RBP20.06■□□□□ 0.8
ACTB-203ENST00000417101 EBPQ15125 230 aaKnown RBP20.06■□□□□ 0.8
ACTB-203ENST00000417101 NUDT13Q86X67 352 aa20.06■□□□□ 0.8
ACTB-203ENST00000417101 DND1Q8IYX4 353 aaKnown RBP20.06■□□□□ 0.8
ACTB-203ENST00000417101 JSRP1Q96MG2 331 aaPredicted RBP20.06■□□□□ 0.8
ACTB-203ENST00000417101 CDK15Q96Q40 435 aa20.06■□□□□ 0.8
ACTB-203ENST00000417101 NOL11Q9H8H0 719 aaKnown RBP20.06■□□□□ 0.8
ACTB-203ENST00000417101 PROK2Q9HC23 129 aa20.06■□□□□ 0.8
ACTB-203ENST00000417101 PSD3Q9NYI0 1048 aa20.06■□□□□ 0.8
ACTB-203ENST00000417101 SPRR3Q9UBC9 169 aa20.06■□□□□ 0.8
ACTB-203ENST00000417101 CHCHD2Q9Y6H1 151 aaPredicted RBP20.06■□□□□ 0.8
ACTB-203ENST00000417101 A0A0G2JNJ9 132 aa20.05■□□□□ 0.8
ACTB-203ENST00000417101 LRRC3CA6NJW4 275 aa20.05■□□□□ 0.8
ACTB-203ENST00000417101 OR6C76A6NM76 312 aa20.05■□□□□ 0.8
ACTB-203ENST00000417101 FOXE1O00358 373 aaPredicted RBP20.05■□□□□ 0.8
ACTB-203ENST00000417101 PGRMC2O15173 223 aa20.05■□□□□ 0.8
ACTB-203ENST00000417101 CLDN9O95484 217 aa20.05■□□□□ 0.8
ACTB-203ENST00000417101 CLPSP04118 112 aa20.05■□□□□ 0.8
ACTB-203ENST00000417101 SLC35E2P0CK97 266 aa20.05■□□□□ 0.8
ACTB-203ENST00000417101 PHBP35232 272 aa20.05■□□□□ 0.8
ACTB-203ENST00000417101 ZFP36L2P47974 494 aaKnown RBP20.05■□□□□ 0.8
ACTB-203ENST00000417101 TECRLQ5HYJ1 363 aa20.05■□□□□ 0.8
ACTB-203ENST00000417101 UBAP2Q5T6F2 1119 aaKnown RBP20.05■□□□□ 0.8
ACTB-203ENST00000417101 C1orf185Q5T7R7 199 aa20.05■□□□□ 0.8
ACTB-203ENST00000417101 C8orf74Q6P047 294 aa20.05■□□□□ 0.8
ACTB-203ENST00000417101 PLD6Q8N2A8 252 aaKnown RBP20.05■□□□□ 0.8
ACTB-203ENST00000417101 PTGR2Q8N8N7 351 aaPredicted RBP20.05■□□□□ 0.8
ACTB-203ENST00000417101 ATP6V1E2Q96A05 226 aa20.05■□□□□ 0.8
ACTB-203ENST00000417101 ZNF559Q9BR84 538 aa20.05■□□□□ 0.8
ACTB-203ENST00000417101 LRRC1Q9BTT6 524 aa20.05■□□□□ 0.8
ACTB-203ENST00000417101 ZNF358Q9NW07 568 aa20.05■□□□□ 0.8
ACTB-203ENST00000417101 NINJ2Q9NZG7 142 aa20.05■□□□□ 0.8
ACTB-203ENST00000417101 Q9UFV3 132 aa20.05■□□□□ 0.8
ACTB-203ENST00000417101 CNOT11Q9UKZ1 510 aaKnown RBP20.05■□□□□ 0.8
ACTB-203ENST00000417101 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.05■□□□□ 0.81e-20■■■□□ 16.4
ACTB-203ENST00000417101 A0A1W2PS29 197 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms