RNA–Protein interactions for RNA: ENST00000416781.1

TTC39DP-201, Transcript of tetratricopeptide repeat domain 39D, pseudogene, humanhuman

BASIC

Gene TTC39DP, Length 1,688 nt, Biotype unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39DP-201ENST00000416781 ARPC3O15145 178 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 TM9SF1O15321 606 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 DHHO43323 396 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 BCAS1O75363 584 aaPredicted RBP5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 UPK3AO75631 287 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 CCNKO75909 580 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 CRHP06850 196 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 CD63P08962 238 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 SBK2P0C263 348 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 GFAPP14136 432 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 CEBPBP17676 345 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 CTPS1P17812 591 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 TGM2P21980 687 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 CRABP1P29762 137 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 MAS1LP35410 378 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 PRCPP42785 496 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 SLC6A12P48065 614 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 CCR8P51685 355 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 DCDC1P59894 354 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 ERVS71-1P61550 626 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 TXNL4AP83876 142 aaKnown RBP5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 BDH1Q02338 343 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 STX3Q13277 289 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 STXBP2Q15833 593 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 GXYLT1Q4G148 440 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 KHDRBS2Q5VWX1 349 aaKnown RBP5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 ADNP2Q6IQ32 1131 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 DENND1BQ6P3S1 775 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 CLEC18BQ6UXF7 455 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 TMEM182Q6ZP80 229 aaPredicted RBP5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 SLC16A12Q6ZSM3 486 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 NIPA1Q7RTP0 329 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 KMT5CQ86Y97 462 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 KIRREL3Q8IZU9 778 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 PQLC3Q8N755 202 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 COLGALT1Q8NBJ5 622 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 CLEC18CQ8NCF0 446 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 GRHL3Q8TE85 626 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 ST6GALNAC6Q969X2 333 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 REPS1Q96D71 796 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 BBC3Q96PG8 261 aaPredicted RBP5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 OLFM1Q99784 485 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 PRRT1Q99946 306 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 C7orf50Q9BRJ6 194 aaKnown RBP5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 TMEM43Q9BTV4 400 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 FICDQ9BVA6 458 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 NUAK2Q9H093 628 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 KLK15Q9H2R5 256 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 HIPK2Q9H2X6 1198 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 FOXP1Q9H334 677 aaPredicted RBP5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 RANBP3Q9H6Z4 567 aaPredicted RBP5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 VIPAS39Q9H9C1 493 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 ANKRA2Q9H9E1 313 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 MEAF6Q9HAF1 191 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 USP29Q9HBJ7 922 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 FSCN3Q9NQT6 498 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 XPNPEP1Q9NQW7 623 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 MYEF2Q9P2K5 600 aaKnown RBP5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 HEY2Q9UBP5 337 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 BCAP29Q9UHQ4 241 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 MKLN1Q9UL63 735 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 RASD1Q9Y272 281 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 GRIP1Q9Y3R0 1128 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 PKP3Q9Y446 797 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 CSNK1G3Q9Y6M4 447 aa5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 EIF3AQ14152 1382 aaKnown RBP5.03□□□□□ -1.6
TTC39DP-201ENST00000416781 MBLAC1A4D2B0 266 aaPredicted RBP5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 FABP12A6NFH5 140 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 TEX22C9J3V5 150 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 MCIDASD6RGH6 385 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 BCKDKO14874 412 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 MID1O15344 667 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 GP1BAP07359 652 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 ALPIP09923 528 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 OR52Z1P0C646 297 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 FGF5P12034 268 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 COX7A2P14406 83 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 XRCC1P18887 633 aaPredicted RBP5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 ITPKBP27987 946 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 EPHX2P34913 555 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 HOXA1P49639 335 aaPredicted RBP5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 RGS4P49798 205 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 ARSFP54793 590 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 SHC2P98077 582 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 CDK16Q00536 496 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 FLI1Q01543 452 aaPredicted RBP5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 CNTN2Q02246 1040 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 HSF2Q03933 536 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 FLOT2Q14254 428 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 PTPRCAPQ14761 206 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 TGFBIQ15582 683 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 NDUFAF6Q330K2 333 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 AMZ1Q400G9 498 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 AASDHQ4L235 1098 aaPredicted RBP5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 LBHQ53QV2 105 aaPredicted RBP5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 DDI2Q5TDH0 399 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 C20orf194Q5TEA3 1177 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 RAET1LQ5VY80 246 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 GRHL2Q6ISB3 625 aa5.02□□□□□ -1.61
TTC39DP-201ENST00000416781 KIRREL2Q6UWL6 708 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms