RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 NADKO95544 446 aaPredicted RBP16.24■□□□□ 0.19
PDLIM2-208ENST00000416159 AIFM1O95831 613 aa16.24■□□□□ 0.19
PDLIM2-208ENST00000416159 IGHG3P01860 377 aa16.24■□□□□ 0.19
PDLIM2-208ENST00000416159 SLC35E2P0CK97 266 aa16.24■□□□□ 0.19
PDLIM2-208ENST00000416159 CCL3P10147 92 aa16.24■□□□□ 0.19
PDLIM2-208ENST00000416159 KIR3DL1P43629 444 aa16.24■□□□□ 0.19
PDLIM2-208ENST00000416159 FOXO1Q12778 655 aa16.24■□□□□ 0.19
PDLIM2-208ENST00000416159 IFT88Q13099 833 aa16.24■□□□□ 0.19
PDLIM2-208ENST00000416159 GXYLT1Q4G148 440 aa16.24■□□□□ 0.19
PDLIM2-208ENST00000416159 RNF111Q6ZNA4 994 aa16.24■□□□□ 0.19
PDLIM2-208ENST00000416159 MILR1Q7Z6M3 343 aa16.24■□□□□ 0.19
PDLIM2-208ENST00000416159 TMEM251Q8N6I4 163 aa16.24■□□□□ 0.19
PDLIM2-208ENST00000416159 RND1Q92730 232 aa16.24■□□□□ 0.19
PDLIM2-208ENST00000416159 SPACA9Q96E40 222 aaPredicted RBP16.24■□□□□ 0.19
PDLIM2-208ENST00000416159 SPOCK3Q9BQ16 436 aa16.24■□□□□ 0.19
PDLIM2-208ENST00000416159 ZBTB26Q9HCK0 441 aa16.24■□□□□ 0.19
PDLIM2-208ENST00000416159 TUBA8Q9NY65 449 aaPredicted RBP16.24■□□□□ 0.19
PDLIM2-208ENST00000416159 ADAM29Q9UKF5 820 aa16.24■□□□□ 0.19
PDLIM2-208ENST00000416159 PHF3Q92576 2039 aaKnown RBP16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 A0A1B0GVC2 190 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 WASHC1A8K0Z3 465 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 TRIM49D1C9J1S8 452 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 NPIPA2E9PIF3 369 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 NPIPA3F8WFD2 350 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 BCKDKO14874 412 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 SERPINB3P29508 390 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 ECHS1P30084 290 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 DNASE1L1P49184 302 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 SLC37A1P57057 533 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 TRAF3Q13114 568 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 SLC10A1Q14973 349 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 GGTA1PQ4G0N0 100 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 EMC4Q5J8M3 183 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 OR52E8Q6IFG1 317 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 LYPD8Q6UX82 237 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 TRILQ7L0X0 811 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 PAGE2Q7Z2X7 111 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 MARVELD2Q8N4S9 558 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 MYRIPQ8NFW9 859 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 DOK4Q8TEW6 326 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 PAQR8Q8TEZ7 354 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 DCAKDQ8WVC6 231 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 NSUN5Q96P11 429 aaKnown RBP16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 GAL3ST4Q96RP7 486 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 SMC6Q96SB8 1091 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 TRIM8Q9BZR9 551 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 MRPL46Q9H2W6 279 aaKnown RBP16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 SH2D2AQ9NP31 389 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 CNIH4Q9P003 139 aa16.23■□□□□ 0.19
PDLIM2-208ENST00000416159 NINQ8N4C6 2090 aa16.22■□□□□ 0.19
PDLIM2-208ENST00000416159 GBAP04062 536 aa16.22■□□□□ 0.19
PDLIM2-208ENST00000416159 SNRPAP09012 282 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-208ENST00000416159 PIK3R1P27986 724 aa16.22■□□□□ 0.19
PDLIM2-208ENST00000416159 PIGAP37287 484 aa16.22■□□□□ 0.19
PDLIM2-208ENST00000416159 MAGEA5P43359 124 aa16.22■□□□□ 0.19
PDLIM2-208ENST00000416159 NR0B1P51843 470 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-208ENST00000416159 LGSNQ5TDP6 509 aa16.22■□□□□ 0.19
PDLIM2-208ENST00000416159 ACAD11Q709F0 780 aa16.22■□□□□ 0.19
PDLIM2-208ENST00000416159 OR4K14Q8NGD5 310 aa16.22■□□□□ 0.19
PDLIM2-208ENST00000416159 UHMK1Q8TAS1 419 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-208ENST00000416159 WWTR1Q9GZV5 400 aa16.22■□□□□ 0.19
PDLIM2-208ENST00000416159 ENKD1Q9H0I2 346 aa16.22■□□□□ 0.19
PDLIM2-208ENST00000416159 ELOVL6Q9H5J4 265 aa16.22■□□□□ 0.19
PDLIM2-208ENST00000416159 LDAHQ9H6V9 325 aa16.22■□□□□ 0.19
PDLIM2-208ENST00000416159 SEMA4BQ9NPR2 832 aaPredicted RBP16.22■□□□□ 0.19
PDLIM2-208ENST00000416159 RNF6Q9Y252 685 aa16.22■□□□□ 0.19
PDLIM2-208ENST00000416159 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-208ENST00000416159 ABCA12Q86UK0 2595 aa16.22■□□□□ 0.19
PDLIM2-208ENST00000416159 ATP6AP2A0A1C7CYW4 349 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 AQP7O14520 342 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 PGRMC2O15173 223 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 SUSD5O60279 629 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 GUCY1B2O75343 617 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 ATP6AP2O75787 350 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 OTCP00480 354 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 KLK1P06870 262 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 RPS17P08708 135 aaKnown RBP16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 FBXO45P0C2W1 286 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 SSTR2P30874 369 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 CHRNB4P30926 498 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 MAN2A2P49641 1150 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 EBPQ15125 230 aaKnown RBP16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 CCNYL2Q5T2Q4 361 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 ZNF295-AS1Q8N0V1 137 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 TAGAPQ8N103 731 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 METTL4Q8N3J2 472 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 FBXW8Q8N3Y1 598 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 FAM13CQ8NE31 585 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 OR4F6Q8NGB9 312 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 OR5M3Q8NGP4 307 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 LILRB4Q8NHJ6 448 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 TRPC4APQ8TEL6 797 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 UCN3Q969E3 161 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 TP53INP1Q96A56 240 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 CXorf21Q9HAI6 301 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 BOKQ9UMX3 212 aaPredicted RBP16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 LIPGQ9Y5X9 500 aa16.21■□□□□ 0.19
PDLIM2-208ENST00000416159 C2orf92A0A1B0GVN3 265 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 EXOC1LA0A1B0GW35 172 aa16.2■□□□□ 0.18
PDLIM2-208ENST00000416159 FIGNL2A6NMB9 653 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms