RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 RPS13P62277 151 aaKnown RBP12.24□□□□□ -0.45
CTHRC1-202ENST00000415886 IFT88Q13099 833 aa12.24□□□□□ -0.45
CTHRC1-202ENST00000415886 SERTAD2Q14140 314 aa12.24□□□□□ -0.45
CTHRC1-202ENST00000415886 ADGRD1Q6QNK2 874 aa12.24□□□□□ -0.45
CTHRC1-202ENST00000415886 CYP20A1Q6UW02 462 aa12.24□□□□□ -0.45
CTHRC1-202ENST00000415886 ARSKQ6UWY0 536 aa12.24□□□□□ -0.45
CTHRC1-202ENST00000415886 IL20RBQ6UXL0 311 aa12.24□□□□□ -0.45
CTHRC1-202ENST00000415886 MILR1Q7Z6M3 343 aa12.24□□□□□ -0.45
CTHRC1-202ENST00000415886 SREK1Q8WXA9 508 aaKnown RBP12.24□□□□□ -0.45
CTHRC1-202ENST00000415886 DAZLQ92904 295 aaKnown RBP12.24□□□□□ -0.45
CTHRC1-202ENST00000415886 ISL2Q96A47 359 aa12.24□□□□□ -0.45
CTHRC1-202ENST00000415886 VMP1Q96GC9 406 aa12.24□□□□□ -0.45
CTHRC1-202ENST00000415886 RBM18Q96H35 190 aaKnown RBP12.24□□□□□ -0.45
CTHRC1-202ENST00000415886 SPG11Q96JI7 2443 aa12.24□□□□□ -0.45
CTHRC1-202ENST00000415886 HPF1Q9NWY4 346 aa12.24□□□□□ -0.45
CTHRC1-202ENST00000415886 AHSPQ9NZD4 102 aa12.24□□□□□ -0.45
CTHRC1-202ENST00000415886 XPR1Q9UBH6 696 aa12.24□□□□□ -0.45
CTHRC1-202ENST00000415886 YARS2Q9Y2Z4 477 aaKnown RBP12.24□□□□□ -0.45
CTHRC1-202ENST00000415886 RNF11Q9Y3C5 154 aa12.24□□□□□ -0.45
CTHRC1-202ENST00000415886 OR14I1A6ND48 311 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 LRRC14BA6NHZ5 514 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 TGFBR3LH3BV60 316 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 CYR61O00622 381 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 BCKDKO14874 412 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 OR6B1O95007 311 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 TBX6O95947 436 aaPredicted RBP12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 FAM153BP0C7A2 387 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 COX7A2P14406 83 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 SOX3P41225 446 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 MAGEA5P43359 124 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 MAGEA12P43365 314 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 NEK2P51955 445 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 ADAM8P78325 824 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 BIKQ13323 160 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 E2F2Q14209 437 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 TERF2Q15554 542 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 FAM153CQ494X1 144 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 TIFABQ6ZNK6 161 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 Q71RC1 249 aaPredicted RBP12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 WDR53Q7Z5U6 358 aaPredicted RBP12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 UBE3DQ7Z6J8 389 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 GPR180Q86V85 440 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 SLC22A16Q86VW1 577 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 TMEM251Q8N6I4 163 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 UBLCP1Q8WVY7 318 aaPredicted RBP12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 ASB15Q8WXK1 588 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 ALPK1Q96QP1 1244 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 SERPINI1Q99574 410 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 MAPKAP1Q9BPZ7 522 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 WDR41Q9HAD4 459 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 ADAP2Q9NPF8 381 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 SEMA4BQ9NPR2 832 aaPredicted RBP12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 DMRT3Q9NQL9 472 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 RASSF1Q9NS23 344 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 PSD3Q9NYI0 1048 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 CRIM1Q9NZV1 1036 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 TBK1Q9UHD2 729 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 DCDC2Q9UHG0 476 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 PHF11Q9UIL8 331 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 PPIEQ9UNP9 301 aaKnown RBP12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 TSC22D4Q9Y3Q8 395 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 CLDN16Q9Y5I7 305 aa12.23□□□□□ -0.45
CTHRC1-202ENST00000415886 NAV3Q8IVL0 2385 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 MYOCOSA0A1B0GUC4 107 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 FOXE1O00358 373 aaPredicted RBP12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 GLSO94925 669 aaPredicted RBP12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 OTCP00480 354 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 IGHG3P01860 377 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 CELA3AP09093 270 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 FOSL1P15407 271 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 BUD31P41223 144 aaPredicted RBP12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 KIR2DL3P43628 341 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 GPR143P51810 404 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 DGKQP52824 942 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 ARFIP1P53367 373 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 LTBQ06643 244 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 CUL3Q13618 768 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 ELAVL1Q15717 326 aaKnown RBP12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 ZNF750Q32MQ0 723 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 SLC25A35Q3KQZ1 300 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 SGO1Q5FBB7 561 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 RGS9BPQ6ZS82 235 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 TRILQ7L0X0 811 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 LCA5Q86VQ0 697 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 CDC20BQ86Y33 519 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 SCUBE1Q8IWY4 988 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 GPALPP1Q8IXQ4 340 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 RNF175Q8N4F7 328 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 EIF1ADQ8N9N8 165 aaKnown RBP12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 L3MBTL4Q8NA19 623 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 TANKQ92844 425 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 CDK15Q96Q40 435 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 RASL10BQ96S79 203 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 SMR3AQ99954 134 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 NTMT1Q9BV86 223 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 ELOVL6Q9H5J4 265 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 RPF2Q9H7B2 306 aaKnown RBP12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 NMRK1Q9NWW6 199 aa12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 PSMC3IPQ9P2W1 217 aaPredicted RBP12.22□□□□□ -0.45
CTHRC1-202ENST00000415886 VTI1BQ9UEU0 232 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms