RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 TMEM156Q8N614 296 aa23.52■■□□□ 1.36
CPNE1-207ENST00000414664 ZNF321PQ8N8H1 164 aa23.52■■□□□ 1.36
CPNE1-207ENST00000414664 KLHL29Q96CT2 875 aa23.52■■□□□ 1.36
CPNE1-207ENST00000414664 EBPLQ9BY08 206 aa23.52■■□□□ 1.36
CPNE1-207ENST00000414664 C1orf109Q9NX04 203 aa23.52■■□□□ 1.36
CPNE1-207ENST00000414664 ANKRD10Q9NXR5 420 aa23.52■■□□□ 1.36
CPNE1-207ENST00000414664 LRFN1Q9P244 771 aa23.52■■□□□ 1.36
CPNE1-207ENST00000414664 MYOTQ9UBF9 498 aa23.52■■□□□ 1.36
CPNE1-207ENST00000414664 VPS4AQ9UN37 437 aa23.52■■□□□ 1.36
CPNE1-207ENST00000414664 TMEM114B3SHH9 223 aa23.51■■□□□ 1.35
CPNE1-207ENST00000414664 ITGA10O75578 1167 aa23.51■■□□□ 1.35
CPNE1-207ENST00000414664 HSPA4LO95757 839 aa23.51■■□□□ 1.35
CPNE1-207ENST00000414664 IGKV3-11P04433 115 aa23.51■■□□□ 1.35
CPNE1-207ENST00000414664 GRK2P25098 689 aa23.51■■□□□ 1.35
CPNE1-207ENST00000414664 HLCSP50747 726 aa23.51■■□□□ 1.35
CPNE1-207ENST00000414664 SSR4P51571 173 aa23.51■■□□□ 1.35
CPNE1-207ENST00000414664 ERVK-8P63133 956 aa23.51■■□□□ 1.35
CPNE1-207ENST00000414664 MPP2Q14168 576 aa23.51■■□□□ 1.35
CPNE1-207ENST00000414664 CHI3L2Q15782 390 aa23.51■■□□□ 1.35
CPNE1-207ENST00000414664 PRR30Q53SZ7 412 aaPredicted RBP23.51■■□□□ 1.35
CPNE1-207ENST00000414664 ZNF766Q5HY98 468 aa23.51■■□□□ 1.35
CPNE1-207ENST00000414664 HHATQ5VTY9 493 aa23.51■■□□□ 1.35
CPNE1-207ENST00000414664 GALNT12Q8IXK2 581 aa23.51■■□□□ 1.35
CPNE1-207ENST00000414664 DDIASQ8IXT1 998 aa23.51■■□□□ 1.35
CPNE1-207ENST00000414664 SAMD14Q8IZD0 417 aaPredicted RBP23.51■■□□□ 1.35
CPNE1-207ENST00000414664 MDS2Q8NDY4 140 aa23.51■■□□□ 1.35
CPNE1-207ENST00000414664 TWIST2Q8WVJ9 160 aa23.51■■□□□ 1.35
CPNE1-207ENST00000414664 C5orf34Q96MH7 638 aa23.51■■□□□ 1.35
CPNE1-207ENST00000414664 TRIM45Q9H8W5 580 aaPredicted RBP23.51■■□□□ 1.35
CPNE1-207ENST00000414664 CXorf21Q9HAI6 301 aa23.51■■□□□ 1.35
CPNE1-207ENST00000414664 LRTM1Q9HBL6 345 aa23.51■■□□□ 1.35
CPNE1-207ENST00000414664 PFDN4Q9NQP4 134 aa23.51■■□□□ 1.35
CPNE1-207ENST00000414664 UTS2RQ9UKP6 389 aa23.51■■□□□ 1.35
CPNE1-207ENST00000414664 ERVK-19Q9WJR5 959 aa23.51■■□□□ 1.35
CPNE1-207ENST00000414664 PYCARD-AS1I3L0S3 204 aa23.5■■□□□ 1.35
CPNE1-207ENST00000414664 PRKNO60260 465 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-207ENST00000414664 LINC00032P0C843 101 aa23.5■■□□□ 1.35
CPNE1-207ENST00000414664 NT5EP21589 574 aa23.5■■□□□ 1.35
CPNE1-207ENST00000414664 MAGOHP61326 146 aaKnown RBP23.5■■□□□ 1.35
CPNE1-207ENST00000414664 NR6A1Q15406 480 aa23.5■■□□□ 1.35
CPNE1-207ENST00000414664 UGT3A2Q3SY77 523 aa23.5■■□□□ 1.35
CPNE1-207ENST00000414664 NOXRED1Q6NXP6 359 aa23.5■■□□□ 1.35
CPNE1-207ENST00000414664 RNF111Q6ZNA4 994 aa23.5■■□□□ 1.35
CPNE1-207ENST00000414664 MMP21Q8N119 569 aa23.5■■□□□ 1.35
CPNE1-207ENST00000414664 ANKRD42Q8N9B4 389 aa23.5■■□□□ 1.35
CPNE1-207ENST00000414664 TMEM178AQ8NBL3 297 aa23.5■■□□□ 1.35
CPNE1-207ENST00000414664 GALNT11Q8NCW6 608 aa23.5■■□□□ 1.35
CPNE1-207ENST00000414664 AGR3Q8TD06 166 aa23.5■■□□□ 1.35
CPNE1-207ENST00000414664 C19orf60Q96EN9 201 aa23.5■■□□□ 1.35
CPNE1-207ENST00000414664 SIGLEC12Q96PQ1 595 aa23.5■■□□□ 1.35
CPNE1-207ENST00000414664 CCT7Q99832 543 aa23.5■■□□□ 1.35
CPNE1-207ENST00000414664 PAIP2Q9BPZ3 127 aaKnown RBP23.5■■□□□ 1.35
CPNE1-207ENST00000414664 TUBB1Q9H4B7 451 aa23.5■■□□□ 1.35
CPNE1-207ENST00000414664 GIMAP4Q9NUV9 329 aa23.5■■□□□ 1.35
CPNE1-207ENST00000414664 ASF1BQ9NVP2 202 aa23.5■■□□□ 1.35
CPNE1-207ENST00000414664 EHD3Q9NZN3 535 aa23.5■■□□□ 1.35
CPNE1-207ENST00000414664 HEY2Q9UBP5 337 aa23.5■■□□□ 1.35
CPNE1-207ENST00000414664 POLR3HQ9Y535 204 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-207ENST00000414664 TMEM120BA0PK00 339 aa23.49■■□□□ 1.35
CPNE1-207ENST00000414664 FEN1P39748 380 aaKnown RBP23.49■■□□□ 1.35
CPNE1-207ENST00000414664 HK2P52789 917 aa23.49■■□□□ 1.35
CPNE1-207ENST00000414664 SLC18A1P54219 525 aa23.49■■□□□ 1.35
CPNE1-207ENST00000414664 C2orf80Q0P641 193 aa23.49■■□□□ 1.35
CPNE1-207ENST00000414664 SPINK14Q6IE38 97 aa23.49■■□□□ 1.35
CPNE1-207ENST00000414664 FAM180AQ6UWF9 173 aa23.49■■□□□ 1.35
CPNE1-207ENST00000414664 Q6ZSR9 355 aa23.49■■□□□ 1.35
CPNE1-207ENST00000414664 SLC29A4Q7RTT9 530 aa23.49■■□□□ 1.35
CPNE1-207ENST00000414664 GPALPP1Q8IXQ4 340 aa23.49■■□□□ 1.35
CPNE1-207ENST00000414664 NUBPLQ8TB37 319 aa23.49■■□□□ 1.35
CPNE1-207ENST00000414664 TMEM125Q96AQ2 219 aa23.49■■□□□ 1.35
CPNE1-207ENST00000414664 TLCD1Q96CP7 247 aa23.49■■□□□ 1.35
CPNE1-207ENST00000414664 NKIRAS1Q9NYS0 192 aa23.49■■□□□ 1.35
CPNE1-207ENST00000414664 ZDHHC2Q9UIJ5 367 aa23.49■■□□□ 1.35
CPNE1-207ENST00000414664 TMED5Q9Y3A6 229 aa23.49■■□□□ 1.35
CPNE1-207ENST00000414664 PTGDR2Q9Y5Y4 395 aa23.49■■□□□ 1.35
CPNE1-207ENST00000414664 A0A1W2PS29 197 aa23.48■■□□□ 1.35
CPNE1-207ENST00000414664 TMEM200CA6NKL6 621 aa23.48■■□□□ 1.35
CPNE1-207ENST00000414664 OR6C76A6NM76 312 aa23.48■■□□□ 1.35
CPNE1-207ENST00000414664 TMEM233B4DJY2 109 aa23.48■■□□□ 1.35
CPNE1-207ENST00000414664 WWP2O00308 870 aa23.48■■□□□ 1.35
CPNE1-207ENST00000414664 OR2J2O76002 312 aa23.48■■□□□ 1.35
CPNE1-207ENST00000414664 NEURL1O76050 574 aa23.48■■□□□ 1.35
CPNE1-207ENST00000414664 RASAL1O95294 804 aa23.48■■□□□ 1.35
CPNE1-207ENST00000414664 ATP1B1P05026 303 aa23.48■■□□□ 1.35
CPNE1-207ENST00000414664 SP1P08047 785 aa23.48■■□□□ 1.35
CPNE1-207ENST00000414664 ARRB2P32121 409 aa23.48■■□□□ 1.35
CPNE1-207ENST00000414664 ST13P50502 369 aaKnown RBP23.48■■□□□ 1.35
CPNE1-207ENST00000414664 ABCE1P61221 599 aaKnown RBP23.48■■□□□ 1.35
CPNE1-207ENST00000414664 KCNC4Q03721 635 aa23.48■■□□□ 1.35
CPNE1-207ENST00000414664 KIAA0040Q15053 153 aa23.48■■□□□ 1.35
CPNE1-207ENST00000414664 AGBL2Q5U5Z8 902 aa23.48■■□□□ 1.35
CPNE1-207ENST00000414664 ZNF468Q5VIY5 522 aaPredicted RBP23.48■■□□□ 1.35
CPNE1-207ENST00000414664 SLC25A25Q6KCM7 469 aa23.48■■□□□ 1.35
CPNE1-207ENST00000414664 HDXQ7Z353 690 aa23.48■■□□□ 1.35
CPNE1-207ENST00000414664 KIRREL3Q8IZU9 778 aa23.48■■□□□ 1.35
CPNE1-207ENST00000414664 LRRC25Q8N386 305 aaPredicted RBP23.48■■□□□ 1.35
CPNE1-207ENST00000414664 BCORP1Q8N888 145 aa23.48■■□□□ 1.35
CPNE1-207ENST00000414664 CDC26Q8NHZ8 85 aa23.48■■□□□ 1.35
CPNE1-207ENST00000414664 LIN28AQ9H9Z2 209 aaKnown RBP23.48■■□□□ 1.35
CPNE1-207ENST00000414664 MYNNQ9NPC7 610 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms