RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 PLIN3O60664 434 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 ERAL1O75616 437 aaKnown RBP10.39□□□□□ -0.75
RFFL-204ENST00000414419 OR6B1O95007 311 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 LDLRP01130 860 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 STSP08842 583 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 NUDT17P0C025 328 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 GP1BBP13224 206 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 GALNSP34059 522 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 SOX3P41225 446 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 ALDH9A1P49189 494 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 NAGLUP54802 743 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 DNAJB13P59910 316 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 TRA2BP62995 288 aaKnown RBP10.39□□□□□ -0.75
RFFL-204ENST00000414419 ACSM2AQ08AH3 577 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 GALNT1Q10472 559 aaPredicted RBP10.39□□□□□ -0.75
RFFL-204ENST00000414419 TBL3Q12788 808 aaKnown RBP10.39□□□□□ -0.75
RFFL-204ENST00000414419 ASPHQ12797 758 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 IMPG1Q17R60 797 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 MPEG1Q2M385 716 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 SPRED3Q2MJR0 410 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 SPIN4Q56A73 249 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 C1QL3Q5VWW1 255 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 HLA-DQA1Q5Y7H0 255 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 ACSM2BQ68CK6 577 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 WDR93Q6P2C0 686 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 DGAT2L6Q6ZPD8 337 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 RTL4Q6ZR62 310 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 SH2D5Q6ZV89 423 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 MDGA2Q7Z553 956 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 FJX1Q86VR8 437 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 SULF2Q8IWU5 870 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 GALNT12Q8IXK2 581 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 PSD4Q8NDX1 1056 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 NUBPLQ8TB37 319 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 DOK4Q8TEW6 326 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 AGAP11Q8TF27 550 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 UCN3Q969E3 161 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 MAGED4Q96JG8 741 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 SGCZQ96LD1 299 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 GPR137Q96N19 417 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 GAL3ST4Q96RP7 486 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 ROPN1BQ9BZX4 212 aaPredicted RBP10.39□□□□□ -0.75
RFFL-204ENST00000414419 GSTO2Q9H4Y5 243 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 ROPN1Q9HAT0 212 aaPredicted RBP10.39□□□□□ -0.75
RFFL-204ENST00000414419 OXSMQ9NWU1 459 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.39□□□□□ -0.75
RFFL-204ENST00000414419 TIMM22Q9Y584 194 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 PCDHA9Q9Y5H5 950 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 V9GYY5 206 aaPredicted RBP10.39□□□□□ -0.75
RFFL-204ENST00000414419 DNAJC13O75165 2243 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 PCNX1Q96RV3 2341 aa10.39□□□□□ -0.75
RFFL-204ENST00000414419 OR6C76A6NM76 312 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 ESPNB1AK53 854 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 ACOT7O00154 380 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 HRKO00198 91 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 ASNA1O43681 348 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 PCDH7O60245 1069 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 IGKV3-11P04433 115 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 P04436 131 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 CPMP14384 443 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 PORP16435 677 aaPredicted RBP10.38□□□□□ -0.75
RFFL-204ENST00000414419 CSNK2A2P19784 350 aaPredicted RBP10.38□□□□□ -0.75
RFFL-204ENST00000414419 NT5EP21589 574 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 GPR85P60893 370 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 PLGLB1Q02325 96 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 SLC18A2Q05940 514 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 BTKQ06187 659 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 ZNF750Q32MQ0 723 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 PIGGQ5H8A4 983 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 SPDYAQ5MJ70 313 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 LIPMQ5VYY2 423 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 FRMD7Q6ZUT3 714 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 C9orf40Q8IXQ3 194 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 GHDCQ8N2G8 530 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 SLC15A4Q8N697 577 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 AENQ8WTP8 325 aaKnown RBP10.38□□□□□ -0.75
RFFL-204ENST00000414419 CHTF18Q8WVB6 975 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 TM4SF18Q96CE8 201 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 KLHL29Q96CT2 875 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 KCNA7Q96RP8 456 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 ACPTQ9BZG2 426 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 CXorf21Q9HAI6 301 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 PFDN4Q9NQP4 134 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 RYDENQ9NUL5 291 aaKnown RBP10.38□□□□□ -0.75
RFFL-204ENST00000414419 SUCOQ9UBS9 1254 aaKnown RBP10.38□□□□□ -0.75
RFFL-204ENST00000414419 PLEKHB1Q9UF11 243 aaPredicted RBP10.38□□□□□ -0.75
RFFL-204ENST00000414419 MCM8Q9UJA3 840 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 SH3BGRL2Q9UJC5 107 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 ZNF780BQ9Y6R6 833 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 ZNF407Q9C0G0 2248 aa10.38□□□□□ -0.75
RFFL-204ENST00000414419 C2orf92A0A1B0GVN3 265 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 A1L4Q6 167 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 WIPF3A6NGB9 483 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 CCL21O00585 134 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 CDC40O60508 579 aaKnown RBP eCLIP10.37□□□□□ -0.75
RFFL-204ENST00000414419 SLC19A2O60779 497 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 TRIM13O60858 407 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 ESRRAP11474 423 aaPredicted RBP10.37□□□□□ -0.75
RFFL-204ENST00000414419 CHN1P15882 459 aa10.37□□□□□ -0.75
RFFL-204ENST00000414419 ABOP16442 354 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms