RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 A0A087WXM4 84 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 A0A1W2PNU3 283 aaPredicted RBP9.41□□□□□ -0.9
DDB1-202ENST00000414411 FITM1A5D6W6 292 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 H0YAE9 185 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 CXCR6O00574 342 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 PTX3P26022 381 aaPredicted RBP9.41□□□□□ -0.9
DDB1-202ENST00000414411 PTPN6P29350 595 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 VSX2P58304 361 aaPredicted RBP9.41□□□□□ -0.9
DDB1-202ENST00000414411 RPS13P62277 151 aaKnown RBP9.41□□□□□ -0.9
DDB1-202ENST00000414411 CYP4F2P78329 520 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 ADARB1P78563 741 aaKnown RBP9.41□□□□□ -0.9
DDB1-202ENST00000414411 ACY1Q03154 408 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 DDX39BQ13838 428 aaKnown RBP9.41□□□□□ -0.9
DDB1-202ENST00000414411 NKG7Q16617 165 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 HKDC1Q2TB90 917 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 TCTE1Q5JU00 501 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 OTUD3Q5T2D3 398 aaPredicted RBP9.41□□□□□ -0.9
DDB1-202ENST00000414411 DEPDC1Q5TB30 811 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 ASPGQ86U10 573 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 CALHM3Q86XJ0 350 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 OFCC1Q8IZS5 231 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 KCT2Q8NC54 265 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 CAMKVQ8NCB2 501 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 OR1L3Q8NH93 324 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 FBXO30Q8TB52 745 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 RERGQ96A58 199 aaPredicted RBP9.41□□□□□ -0.9
DDB1-202ENST00000414411 AURKBQ96GD4 344 aaPredicted RBP9.41□□□□□ -0.9
DDB1-202ENST00000414411 APIPQ96GX9 242 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 ITCHQ96J02 903 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 MPP4Q96JB8 637 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 FCRL1Q96LA6 429 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 DEPDC7Q96QD5 511 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 CMKLR1Q99788 373 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 TBCDQ9BTW9 1192 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 SPRTNQ9H040 489 aaPredicted RBP9.41□□□□□ -0.9
DDB1-202ENST00000414411 RMND5AQ9H871 391 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 FBXO8Q9NRD0 319 aa9.41□□□□□ -0.9
DDB1-202ENST00000414411 AHCTF1Q8WYP5 2266 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 B4E171 279 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 TMEM150CB9EJG8 249 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 H3BSA7 217 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 ZSCAN9O15535 394 aaPredicted RBP9.4□□□□□ -0.9
DDB1-202ENST00000414411 NDUFS4O43181 175 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 TGFB1P01137 390 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 ALPLP05186 524 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 SMIM10L1P0DMW3 83 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 CCL4P13236 92 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 TSPAN7P41732 249 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 GZMMP51124 257 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 ALDH3A2P51648 485 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 HNRNPFP52597 415 aaKnown RBP9.4□□□□□ -0.9
DDB1-202ENST00000414411 EMP3P54852 163 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 SNRPNP63162 240 aaKnown RBP9.4□□□□□ -0.9
DDB1-202ENST00000414411 MC2RQ01718 297 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 CSTF3Q12996 717 aaKnown RBP9.4□□□□□ -0.9
DDB1-202ENST00000414411 DAG1Q14118 895 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 IL11RAQ14626 422 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 KHDRBS2Q5VWX1 349 aaKnown RBP9.4□□□□□ -0.9
DDB1-202ENST00000414411 MSANTD1Q6ZTZ1 278 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 UBE3DQ7Z6J8 389 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 BPHLQ86WA6 291 aaPredicted RBP9.4□□□□□ -0.9
DDB1-202ENST00000414411 C10orf111Q8N326 155 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 TMEM132CQ8N3T6 1108 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 CSNK1A1LQ8N752 337 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 ADAMTS16Q8TE57 1224 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 FAM162AQ96A26 154 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 TMIGD2Q96BF3 282 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 MS4A6EQ96DS6 147 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 C11orf24Q96F05 449 aaPredicted RBP9.4□□□□□ -0.9
DDB1-202ENST00000414411 SLC47A1Q96FL8 570 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 SMIM10Q96HG1 83 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 OR6C1Q96RD1 312 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 F2RL3Q96RI0 385 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 INPP5KQ9BT40 448 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 STRADBQ9C0K7 418 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 KLHL31Q9H511 634 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 SOX17Q9H6I2 414 aaPredicted RBP9.4□□□□□ -0.9
DDB1-202ENST00000414411 STARD5Q9NSY2 213 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 DNAJB9Q9UBS3 223 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 SERTAD3Q9UJW9 196 aa9.4□□□□□ -0.9
DDB1-202ENST00000414411 FER1L5A0AVI2 2057 aa9.39□□□□□ -0.91
DDB1-202ENST00000414411 AKAP13Q12802 2813 aa9.39□□□□□ -0.91
DDB1-202ENST00000414411 EFCAB7A8K855 629 aa9.39□□□□□ -0.91
DDB1-202ENST00000414411 HYAL3O43820 417 aaPredicted RBP9.39□□□□□ -0.91
DDB1-202ENST00000414411 OR2B3O76000 313 aa9.39□□□□□ -0.91
DDB1-202ENST00000414411 SEC24DO94855 1032 aaPredicted RBP9.39□□□□□ -0.91
DDB1-202ENST00000414411 B3GALT4O96024 378 aa9.39□□□□□ -0.91
DDB1-202ENST00000414411 HPRP00739 348 aa9.39□□□□□ -0.91
DDB1-202ENST00000414411 ALBP02768 609 aa9.39□□□□□ -0.91
DDB1-202ENST00000414411 STATHP02808 62 aa9.39□□□□□ -0.91
DDB1-202ENST00000414411 EIF2S1P05198 315 aaKnown RBP9.39□□□□□ -0.91
DDB1-202ENST00000414411 SLC35G6P0C7Q6 338 aa9.39□□□□□ -0.91
DDB1-202ENST00000414411 FGF5P12034 268 aa9.39□□□□□ -0.91
DDB1-202ENST00000414411 SLC5A2P31639 672 aa9.39□□□□□ -0.91
DDB1-202ENST00000414411 CDKN2CP42773 168 aa9.39□□□□□ -0.91
DDB1-202ENST00000414411 ARFIP1P53367 373 aa9.39□□□□□ -0.91
DDB1-202ENST00000414411 TARDBPQ13148 414 aaKnown RBP eCLIP9.39□□□□□ -0.91
DDB1-202ENST00000414411 EIF3IQ13347 325 aaKnown RBP9.39□□□□□ -0.91
DDB1-202ENST00000414411 DPY19L1Q2PZI1 675 aa9.39□□□□□ -0.91
DDB1-202ENST00000414411 NOXRED1Q6NXP6 359 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms