RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 DLGAP4Q9Y2H0 992 aa13.69□□□□□ -0.22
CHD1-202ENST00000414220 CSAG2Q9Y5P2 127 aa13.69□□□□□ -0.22
CHD1-202ENST00000414220 KALRNO60229 2985 aa13.69□□□□□ -0.22
CHD1-202ENST00000414220 OR6C76A6NM76 312 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 A8MVJ9 347 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 TMEM114B3SHH9 223 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 DDAH2O95865 285 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 SERPINE1P05121 402 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 IL3P08700 152 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 CPMP14384 443 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 PRPH2P23942 346 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 MAPK1P28482 360 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 TRHRP34981 398 aaPredicted RBP13.68□□□□□ -0.22
CHD1-202ENST00000414220 RNF4P78317 190 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 ZNF763Q0D2J5 394 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 C2orf80Q0P641 193 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 NR6A1Q15406 480 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 CHI3L2Q15782 390 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 KANK2Q63ZY3 851 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 SLC25A25Q6KCM7 469 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 OPN5Q6U736 354 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 ZCCHC23Q6ZST2 131 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 DNAJB8Q8NHS0 232 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 CDC26Q8NHZ8 85 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 NUBPLQ8TB37 319 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 SLC22A8Q8TCC7 542 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 ZNF721Q8TF20 911 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 C16orf78Q8WTQ4 265 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 LRTM1Q9HBL6 345 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 MIEF1Q9NQG6 463 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 HPF1Q9NWY4 346 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 ANKRD10Q9NXR5 420 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 MYOTQ9UBF9 498 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 UTS2RQ9UKP6 389 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 TMED5Q9Y3A6 229 aa13.68□□□□□ -0.22
CHD1-202ENST00000414220 NPIPB8E9PQR5 432 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 CHRNGP07510 517 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 SP1P08047 785 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 MPIP34949 423 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 ERVK-8P63133 956 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 IGFBP7Q16270 282 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 MAPKAPK3Q16644 382 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 NOXRED1Q6NXP6 359 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 IKBIPQ70UQ0 350 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 HDXQ7Z353 690 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 TRIM42Q8IWZ5 723 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 CYP4Z2PQ8N1L4 340 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 LRRC25Q8N386 305 aaPredicted RBP13.67□□□□□ -0.22
CHD1-202ENST00000414220 ANKRD42Q8N9B4 389 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 OR7G1Q8NGA0 311 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 TWIST2Q8WVJ9 160 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 PPP3R2Q96LZ3 170 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 NPAS2Q99743 824 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 EBPLQ9BY08 206 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 BRINP2Q9C0B6 783 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 CLMPQ9H6B4 373 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 TMBIM4Q9HC24 238 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 TIMMDC1Q9NPL8 285 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 ASF1BQ9NVP2 202 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 EHD3Q9NZN3 535 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 ERVK-19Q9WJR5 959 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.67□□□□□ -0.22
CHD1-202ENST00000414220 DNAJC15Q9Y5T4 150 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 SCN2AQ99250 2005 aa13.67□□□□□ -0.22
CHD1-202ENST00000414220 DOCK10Q96BY6 2186 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 WASHC1A8K0Z3 465 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 CAPN14A8MX76 684 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 KLRC4-KLRK1H3BQV0 150 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 WWP2O00308 870 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 SLC25A12O75746 678 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 BCAS2O75934 225 aaPredicted RBP13.66□□□□□ -0.22
CHD1-202ENST00000414220 OR2J2O76002 312 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 LINC00032P0C843 101 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 FEN1P39748 380 aaKnown RBP13.66□□□□□ -0.22
CHD1-202ENST00000414220 SLC18A1P54219 525 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 ABCE1P61221 599 aaKnown RBP13.66□□□□□ -0.22
CHD1-202ENST00000414220 MAGOHP61326 146 aaKnown RBP13.66□□□□□ -0.22
CHD1-202ENST00000414220 RAE1P78406 368 aaKnown RBP13.66□□□□□ -0.22
CHD1-202ENST00000414220 STX3Q13277 289 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 MPEG1Q2M385 716 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 SPINK14Q6IE38 97 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 DND1Q8IYX4 353 aaKnown RBP13.66□□□□□ -0.22
CHD1-202ENST00000414220 TAGAPQ8N103 731 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 SLC15A4Q8N697 577 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 AMER2Q8N7J2 671 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 AGR3Q8TD06 166 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 GRHL3Q8TE85 626 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 FAR1Q8WVX9 515 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 BBS4Q96RK4 519 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 TRIM45Q9H8W5 580 aaPredicted RBP13.66□□□□□ -0.22
CHD1-202ENST00000414220 CXorf21Q9HAI6 301 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 MYNNQ9NPC7 610 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 KLHL1Q9NR64 748 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 OLAHQ9NV23 265 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 ZNF223Q9UK11 482 aaPredicted RBP13.66□□□□□ -0.22
CHD1-202ENST00000414220 CES1P1Q9UKY3 287 aa13.66□□□□□ -0.22
CHD1-202ENST00000414220 KLF13Q9Y2Y9 288 aaPredicted RBP13.66□□□□□ -0.22
CHD1-202ENST00000414220 POLR3HQ9Y535 204 aaPredicted RBP13.66□□□□□ -0.22
CHD1-202ENST00000414220 BOD1L1Q8NFC6 3051 aa13.65□□□□□ -0.22
CHD1-202ENST00000414220 C2orf92A0A1B0GVN3 265 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms