RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ZNF780AO75290 641 aaPredicted RBP16.73■□□□□ 0.27
SDCBP-202ENST00000413219 CSF2P04141 144 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 RB1P06400 928 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 FHP07954 510 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 CTSAP10619 480 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 ACADMP11310 421 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 MYL12AP19105 171 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 FGF9P31371 208 aaPredicted RBP16.73■□□□□ 0.27
SDCBP-202ENST00000413219 KCNJ5P48544 419 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 CTSCP53634 463 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 EPHB3P54753 998 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 HOXC5Q00444 222 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 TARDBPQ13148 414 aaKnown RBP eCLIP16.73■□□□□ 0.27
SDCBP-202ENST00000413219 RPS26P11Q5JNZ5 115 aaPredicted RBP16.73■□□□□ 0.27
SDCBP-202ENST00000413219 Q6ZVL8 140 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 YIPF7Q8N8F6 280 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 RASGEF1AQ8N9B8 481 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 SLC43A3Q8NBI5 491 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 PLA2G15Q8NCC3 412 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 TMEM163Q8TC26 289 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 OR5P2Q8WZ92 322 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 FGF11Q92914 225 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 TMEM19Q96HH6 336 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 IRF2BPLQ9H1B7 796 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 IL21Q9HBE4 155 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 WDR70Q9NW82 654 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 SLC25A13Q9UJS0 675 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 NDRG2Q9UN36 371 aaKnown RBP16.73■□□□□ 0.27
SDCBP-202ENST00000413219 PLXNA2O75051 1894 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 WASH3PC4AMC7 463 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 SAP18O00422 153 aaKnown RBP16.73■□□□□ 0.27
SDCBP-202ENST00000413219 PRRG1O14668 218 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 TLX2O43763 284 aaPredicted RBP16.73■□□□□ 0.27
SDCBP-202ENST00000413219 TBX19O60806 448 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 C1orf105O95561 183 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 OPRD1P41143 372 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 P2RX3P56373 397 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 RIN1Q13671 783 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 TATDN3Q17R31 274 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 FLYWCH1Q4VC44 716 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 CST9Q5W186 159 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 TRIQKQ629K1 86 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 BCDIN3DQ7Z5W3 292 aaKnown RBP16.73■□□□□ 0.27
SDCBP-202ENST00000413219 C19orf18Q8NEA5 215 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 UBE2E3Q969T4 207 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 ZNF582Q96NG8 517 aaPredicted RBP16.73■□□□□ 0.27
SDCBP-202ENST00000413219 RIOK2Q9BVS4 552 aaKnown RBP16.73■□□□□ 0.27
SDCBP-202ENST00000413219 BEX2Q9BXY8 128 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 PPP1R3EQ9H7J1 279 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 DIABLOQ9NR28 239 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 SEMA3GQ9NS98 782 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 CFAP97Q9P2B7 532 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 THSD7BQ9C0I4 1608 aa16.72■□□□□ 0.27
SDCBP-202ENST00000413219 CCNYL3P0C7X3 344 aa16.72■□□□□ 0.27
SDCBP-202ENST00000413219 GAAP10253 952 aa16.72■□□□□ 0.27
SDCBP-202ENST00000413219 EFNB1P98172 346 aa16.72■□□□□ 0.27
SDCBP-202ENST00000413219 GPNMBQ14956 572 aa16.72■□□□□ 0.27
SDCBP-202ENST00000413219 CD200R1LQ6Q8B3 271 aa16.72■□□□□ 0.27
SDCBP-202ENST00000413219 LILRA3Q8N6C8 439 aaPredicted RBP16.72■□□□□ 0.27
SDCBP-202ENST00000413219 ATP6V1C2Q8NEY4 427 aa16.72■□□□□ 0.27
SDCBP-202ENST00000413219 SLC7A13Q8TCU3 470 aa16.72■□□□□ 0.27
SDCBP-202ENST00000413219 ZNF607Q96SK3 696 aa16.72■□□□□ 0.27
SDCBP-202ENST00000413219 GTPBP2Q9BX10 602 aaKnown RBP16.72■□□□□ 0.27
SDCBP-202ENST00000413219 SH2B3Q9UQQ2 575 aa16.72■□□□□ 0.27
SDCBP-202ENST00000413219 PCM1Q15154 2024 aa16.72■□□□□ 0.27
SDCBP-202ENST00000413219 A0A1W2PRQ8 180 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 GRM6O15303 877 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 MMP20O60882 483 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 NME6O75414 186 aaPredicted RBP16.71■□□□□ 0.27
SDCBP-202ENST00000413219 PRKAR1AP10644 381 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 SLC2A2P11168 524 aaPredicted RBP16.71■□□□□ 0.27
SDCBP-202ENST00000413219 TNNI3P19429 210 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 GABRA5P31644 462 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 HTR2BP41595 481 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 GAS1P54826 345 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 RAB40BQ12829 278 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 ZNF284Q2VY69 593 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 NXPE4Q6UWF7 544 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 DEF8Q6ZN54 512 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 ZNF767PQ75MW2 155 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 CADM2Q8N3J6 435 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 CHST14Q8NCH0 376 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 SLC5A11Q8WWX8 675 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 UFD1Q92890 307 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 TMEM203Q969S6 136 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 C1GALT1C1Q96EU7 318 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 IGSF21Q96ID5 467 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 RSPO3Q9BXY4 272 aaPredicted RBP16.71■□□□□ 0.27
SDCBP-202ENST00000413219 ING3Q9NXR8 418 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 EXOSC1Q9Y3B2 195 aaKnown RBP16.71■□□□□ 0.27
SDCBP-202ENST00000413219 ALG5Q9Y673 324 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 SNTNA6NMZ2 147 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 URODP06132 367 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 FAM157BP0CG42 384 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 ACP2P11117 423 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 ETV3P41162 512 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 GIPRP48546 466 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 CLDN20P56880 219 aa16.71■□□□□ 0.27
SDCBP-202ENST00000413219 RPS25P62851 125 aaKnown RBP16.71■□□□□ 0.27
SDCBP-202ENST00000413219 GPLD1P80108 840 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms