RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 EMC3Q9P0I2 261 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 CD84Q9UIB8 345 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 SNX11Q9Y5W9 270 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 FKBP7Q9Y680 259 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 USP2O75604 605 aaPredicted RBP13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 ARL6IP5O75915 188 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 HSD3B1P14060 373 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 HSD3B2P26439 372 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 MMP12P39900 470 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 SMAD3P84022 425 aaKnown RBP13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 CLVS2Q5SYC1 327 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 TMEM145Q8NBT3 493 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 HCAR2Q8TDS4 363 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 CREB3L4Q8TEY5 395 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 ST8SIA4Q92187 359 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 ZBED6CLQ96FA7 236 aaPredicted RBP13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 ASIC5Q9NY37 505 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 ZNF226Q9NYT6 803 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 MICAL3Q7RTP6 2002 aa13.26□□□□□ -0.29
CLTCL1-201ENST00000412649 RIIAD1A6NNX1 92 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 FAM25EA8MYX2 175 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 ERVH48-1M5A8F1 160 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 GPR32O75388 356 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 ECDO95905 644 aaPredicted RBP13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 GASTP01350 101 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 GBX1Q14549 363 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 SFRP4Q6FHJ7 346 aaPredicted RBP13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 TMEM39AQ9NV64 488 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 KLK8O60259 260 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 FCER2P06734 321 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 ACRV1P26436 265 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 HOXC13P31276 330 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 MAPK9P45984 424 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 PER3P56645 1201 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 CLDN20P56880 219 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 SP140Q13342 867 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 PLD1Q13393 1074 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 AGTRAPQ6RW13 159 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 SBSNQ6UWP8 590 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 PGBD5Q8N414 524 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 ZBTB44Q8NCP5 570 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 RAET1EQ8TD07 263 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 TIFAQ96CG3 184 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 TCEAL4Q96EI5 215 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 EFCAB11Q9BUY7 163 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 TAS2R10Q9NYW0 307 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 GPR52Q9Y2T5 361 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 CREBL2O60519 120 aaPredicted RBP13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 NCR1O76036 304 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 HMGCLP35914 325 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 CTBP2P56545 445 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 ACVR1Q04771 509 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 GPR68Q15743 365 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 CEACAM19Q7Z692 300 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 SCD5Q86SK9 330 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 SNX33Q8WV41 574 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 TBC1D20Q96BZ9 403 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 SPNS1Q9H2V7 528 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 OR51B5Q9H339 312 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 TXNRD2Q9NNW7 524 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 IFT46Q9NQC8 304 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 CDH10Q9Y6N8 788 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 INPPL1O15357 1258 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 GPR39O43194 453 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 ATG13O75143 517 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 IFNGP01579 166 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 GABRA5P31644 462 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 TAP2Q03519 686 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 TEX261Q6UWH6 196 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 WASH2PQ6VEQ5 465 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 GLCCI1Q86VQ1 547 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 LRRC28Q86X40 367 aaPredicted RBP13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 TMEM163Q8TC26 289 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 RAD51AP1Q96B01 352 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 SMIM14Q96QK8 99 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 ACTL8Q9H568 366 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 CAPN10Q9HC96 672 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 OR6C2Q9NZP2 312 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 ZNF225Q9UK10 706 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 PCDHGA2Q9Y5H1 932 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 ACTL7AQ9Y615 435 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 U3KQ87 197 aa13.25□□□□□ -0.29
CLTCL1-201ENST00000412649 A0A1B0GVC2 190 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 A6NIN4 97 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 I6L893 689 aaPredicted RBP13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 PDCD5O14737 125 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 PIPP12273 146 aaPredicted RBP13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 HK1P19367 917 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 UQCRC2P22695 453 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 RAB40BQ12829 278 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 DOC2AQ14183 400 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 C4orf46Q504U0 113 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 ARHGAP15Q53QZ3 475 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 TPGS1Q6ZTW0 290 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 KRT77Q7Z794 578 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 SUSD3Q96L08 255 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 OR10A4Q9H209 315 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 EQTNQ9NQ60 294 aa13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 ZCCHC3Q9NUD5 404 aaKnown RBP13.24□□□□□ -0.29
CLTCL1-201ENST00000412649 NDUFB11Q9NX14 153 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms