RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 TIMP4Q99727 224 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ERVK-6Q9BXR3 956 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 CD244Q9BZW8 370 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 EPB41L4BQ9H329 900 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 OR51B5Q9H339 312 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 SMYD2Q9NRG4 433 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 MS4A12Q9NXJ0 267 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 RNF112Q9ULX5 631 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ERVK-19Q9WJR5 959 aa13.08□□□□□ -0.32
HLA-DQB2-229ENST00000411527 HRNRQ86YZ3 2850 aaPredicted RBP13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 KIAA1549Q9HCM3 1950 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 TRIM3O75382 744 aaPredicted RBP13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 PRKRAO75569 313 aaKnown RBP13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ATE1O95260 518 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ACSL3O95573 720 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 EPXP11678 715 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 TLX1P31314 330 aaPredicted RBP13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 RAP1GDS1P52306 607 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ATP6V0D1P61421 351 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 DR1Q01658 176 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 CRYZQ08257 329 aaKnown RBP13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ILF2Q12905 390 aaKnown RBP13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 KEAP1Q14145 624 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 NTRK2Q16620 822 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 DEFB113Q30KQ7 82 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 DEPDC1Q5TB30 811 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 SYDE1Q6ZW31 735 aaPredicted RBP13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 GPR180Q86V85 440 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 KIF18BQ86Y91 864 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ST13P4Q8IZP2 240 aaPredicted RBP13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 TAGAPQ8N103 731 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 RNF175Q8N4F7 328 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 PDPRQ8NCN5 879 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 WFDC11Q8NEX6 87 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 OR7G3Q8NG95 312 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 LINC01560Q8TB33 94 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 RGMAQ96B86 450 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ZNF597Q96LX8 424 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 TRIM31Q9BZY9 425 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 WWTR1Q9GZV5 400 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 PHF11Q9UIL8 331 aa13.07□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ANKRD33BA6NCL7 494 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 WASHC1A8K0Z3 465 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 E7ESA3 106 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 TP53I11O14683 189 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 OR10H2O60403 315 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 SEC31AO94979 1220 aaKnown RBP13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 STMN1P16949 149 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 SERPINB1P30740 379 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 RPL21P46778 160 aaKnown RBP13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 AGFG1P52594 562 aaKnown RBP13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ZNF136P52737 540 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 HNRNPH2P55795 449 aaKnown RBP13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 SLC37A1P57057 533 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 TNFRSF17Q02223 184 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 LTBQ06643 244 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 DDX39BQ13838 428 aaKnown RBP13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 E2F2Q14209 437 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 SF3B4Q15427 424 aaKnown RBP eCLIP13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 TBCELQ5QJ74 424 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 TMEM64Q6YI46 380 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 Q71RC1 249 aaPredicted RBP13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 LRRC70Q7Z2Q7 622 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 BIVMQ86UB2 503 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 PM20D2Q8IYS1 436 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ZBED8Q8IZ13 594 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 RIT1Q92963 219 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 HSPBAP1Q96EW2 488 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 SMR3AQ99954 134 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 TXNDC16Q9P2K2 825 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 CAMK2AQ9UQM7 478 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 SLC6A5Q9Y345 797 aa13.06□□□□□ -0.32
HLA-DQB2-229ENST00000411527 FLNAP21333 2647 aaKnown RBP13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 C2orf92A0A1B0GVN3 265 aa13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 GLOD5A6NK44 160 aa13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 OR6C76A6NM76 312 aa13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 CAPN14A8MX76 684 aa13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 CXorf49A8MYA2 514 aaPredicted RBP13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 TP73O15350 636 aa13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 GPR75O95800 540 aa13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 BUD31P41223 144 aaPredicted RBP13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 FBXW4P57775 412 aa13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 EBPQ15125 230 aaKnown RBP13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 SPRED3Q2MJR0 410 aa13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 NSUN5P2Q63ZY6 315 aa13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 BICRALQ6AI39 1079 aa13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 VASNQ6EMK4 673 aa13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 HUS1BQ8NHY5 278 aa13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 UBXN10Q96LJ8 280 aa13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 TRIB1Q96RU8 372 aa13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 PELOQ9BRX2 385 aaKnown RBP13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 CENPKQ9BS16 269 aa13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 PRDM14Q9GZV8 571 aa13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 RYDENQ9NUL5 291 aaKnown RBP13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 OPTCQ9UBM4 332 aa13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 ADGRE2Q9UHX3 823 aa13.05□□□□□ -0.32
HLA-DQB2-229ENST00000411527 EEF1E1-BLOC1S5C9J1V9 151 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 PLPP1O14494 284 aa13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 EEF1E1O43324 174 aaKnown RBP13.04□□□□□ -0.32
HLA-DQB2-229ENST00000411527 CLPSP04118 112 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms