RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 SOX18P35713 384 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 SLC1A6P48664 564 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 C21orf58P58505 322 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 OCRLQ01968 901 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 ID2Q02363 134 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 NR6A1Q15406 480 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 SPDYAQ5MJ70 313 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 DGAT2L6Q6ZPD8 337 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 RPS19BP1Q86WX3 136 aaKnown RBP13.02□□□□□ -0.33
GYPC-203ENST00000409836 TRIM42Q8IWZ5 723 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 OR4N5Q8IXE1 308 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 MMP21Q8N119 569 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 ZNF781Q8N8C0 355 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 ANKRD42Q8N9B4 389 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 MDS2Q8NDY4 140 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 PPP1R14CQ8TAE6 165 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 UCN3Q969E3 161 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 C19orf60Q96EN9 201 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 RBM18Q96H35 190 aaKnown RBP13.02□□□□□ -0.33
GYPC-203ENST00000409836 ILKAPQ9H0C8 392 aaPredicted RBP13.02□□□□□ -0.33
GYPC-203ENST00000409836 EPN3Q9H201 632 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 PFDN4Q9NQP4 134 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.02□□□□□ -0.33
GYPC-203ENST00000409836 ZNF446Q9NWS9 450 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 ABI3Q9P2A4 366 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 COPS7AQ9UBW8 275 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 ZNF639Q9UID6 485 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 PSME2Q9UL46 239 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 CSAG2Q9Y5P2 127 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 POLEQ07864 2286 aa13.02□□□□□ -0.33
GYPC-203ENST00000409836 TRAV17A0A0B4J275 112 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 WASHC1A8K0Z3 465 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 MAN1A2O60476 641 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 SLITRK5O94991 958 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 WDPCPO95876 746 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 JUNP05412 331 aaKnown RBP13.01□□□□□ -0.33
GYPC-203ENST00000409836 LINC00032P0C843 101 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 PORP16435 677 aaPredicted RBP13.01□□□□□ -0.33
GYPC-203ENST00000409836 CSNK2A2P19784 350 aaPredicted RBP13.01□□□□□ -0.33
GYPC-203ENST00000409836 HK2P52789 917 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 SLC37A1P57057 533 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 RNF4P78317 190 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 MGAT2Q10469 447 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 MAP4K2Q12851 820 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 STX3Q13277 289 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 ZNF169Q14929 603 aaPredicted RBP13.01□□□□□ -0.33
GYPC-203ENST00000409836 MPEG1Q2M385 716 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 PRICKLE4Q2TBC4 344 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 RFTN2Q52LD8 501 aaPredicted RBP13.01□□□□□ -0.33
GYPC-203ENST00000409836 HSDL2Q6YN16 418 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 LINC00696Q6ZRV3 163 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 PTRH1Q86Y79 214 aaKnown RBP13.01□□□□□ -0.33
GYPC-203ENST00000409836 GALNT12Q8IXK2 581 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 C9orf40Q8IXQ3 194 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 GPALPP1Q8IXQ4 340 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 BEST3Q8N1M1 668 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 LRRC25Q8N386 305 aaPredicted RBP13.01□□□□□ -0.33
GYPC-203ENST00000409836 ZNF441Q8N8Z8 693 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 C17orf47Q8NEP4 570 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 SUN3Q8TAQ9 357 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 RIT1Q92963 219 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 KLHL29Q96CT2 875 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 SENP5Q96HI0 755 aaPredicted RBP13.01□□□□□ -0.33
GYPC-203ENST00000409836 C3orf30Q96M34 536 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 EBPLQ9BY08 206 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 DEFB126Q9BYW3 111 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 THAP1Q9NVV9 213 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 MYOTQ9UBF9 498 aa13.01□□□□□ -0.33
GYPC-203ENST00000409836 POLR3HQ9Y535 204 aaPredicted RBP13.01□□□□□ -0.33
GYPC-203ENST00000409836 GCN1Q92616 2671 aaKnown RBP13□□□□□ -0.33
GYPC-203ENST00000409836 WDR91A4D1P6 747 aa13□□□□□ -0.33
GYPC-203ENST00000409836 A8MUA0 341 aa13□□□□□ -0.33
GYPC-203ENST00000409836 FCHO1O14526 889 aa13□□□□□ -0.33
GYPC-203ENST00000409836 PRKNO60260 465 aaPredicted RBP13□□□□□ -0.33
GYPC-203ENST00000409836 OR10H2O60403 315 aa13□□□□□ -0.33
GYPC-203ENST00000409836 SEC22BO75396 215 aa13□□□□□ -0.33
GYPC-203ENST00000409836 ZFAND5O76080 213 aa13□□□□□ -0.33
GYPC-203ENST00000409836 S1PR1P21453 382 aa13□□□□□ -0.33
GYPC-203ENST00000409836 TACR1P25103 407 aa13□□□□□ -0.33
GYPC-203ENST00000409836 FRKP42685 505 aaPredicted RBP13□□□□□ -0.33
GYPC-203ENST00000409836 ASMTP46597 345 aa13□□□□□ -0.33
GYPC-203ENST00000409836 RPL14P50914 215 aaKnown RBP13□□□□□ -0.33
GYPC-203ENST00000409836 XKP51811 444 aa13□□□□□ -0.33
GYPC-203ENST00000409836 RPL38P63173 70 aaKnown RBP13□□□□□ -0.33
GYPC-203ENST00000409836 DUSP2Q05923 314 aa13□□□□□ -0.33
GYPC-203ENST00000409836 BTKQ06187 659 aa13□□□□□ -0.33
GYPC-203ENST00000409836 TUBA3CQ13748 450 aa13□□□□□ -0.33
GYPC-203ENST00000409836 EBPQ15125 230 aaKnown RBP13□□□□□ -0.33
GYPC-203ENST00000409836 ATP6AP1LQ52LC2 224 aa13□□□□□ -0.33
GYPC-203ENST00000409836 C6orf136Q5SQH8 315 aa13□□□□□ -0.33
GYPC-203ENST00000409836 ATG16L1Q676U5 607 aa13□□□□□ -0.33
GYPC-203ENST00000409836 TUBA3EQ6PEY2 450 aa13□□□□□ -0.33
GYPC-203ENST00000409836 ZNF227Q86WZ6 799 aa13□□□□□ -0.33
GYPC-203ENST00000409836 DDIASQ8IXT1 998 aa13□□□□□ -0.33
GYPC-203ENST00000409836 VWA5B2Q8N398 1253 aa13□□□□□ -0.33
GYPC-203ENST00000409836 ZNF321PQ8N8H1 164 aa13□□□□□ -0.33
GYPC-203ENST00000409836 ZNF615Q8N8J6 731 aa13□□□□□ -0.33
GYPC-203ENST00000409836 OR7G1Q8NGA0 311 aa13□□□□□ -0.33
GYPC-203ENST00000409836 AGR3Q8TD06 166 aa13□□□□□ -0.33
GYPC-203ENST00000409836 MTERF3Q96E29 417 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms