RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 CPNE6O95741 557 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 ACADSP16219 412 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 ACTR3P61158 418 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 ABHD18Q0P651 414 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 ERICH5Q6P6B1 374 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 RTL4Q6ZR62 310 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 PTCHD4Q6ZW05 846 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 DENND6BQ8NEG7 585 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 SLC38A4Q969I6 547 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 DUSP23Q9BVJ7 150 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 PRR14Q9BWN1 585 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 TRIM4Q9C037 500 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 TRPV4Q9HBA0 871 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 TEKT2Q9UIF3 430 aa10.8□□□□□ -0.68
SNX13-202ENST00000409604 DUXAA6NLW8 204 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 EIF3FO00303 357 aaPredicted RBP10.79□□□□□ -0.68
SNX13-202ENST00000409604 AIFM1O95831 613 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 GKN3PP0CG01 181 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 CDK9P50750 372 aaKnown RBP10.79□□□□□ -0.68
SNX13-202ENST00000409604 GRIK2Q13002 908 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 ANGPT1Q15389 498 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 DECR1Q16698 335 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 SLC5A12Q1EHB4 618 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 ATG9BQ674R7 924 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 EPHX4Q8IUS5 362 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 SAMD14Q8IZD0 417 aaPredicted RBP10.79□□□□□ -0.68
SNX13-202ENST00000409604 HS3ST5Q8IZT8 346 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 C8orf59Q8N0T1 100 aaPredicted RBP10.79□□□□□ -0.68
SNX13-202ENST00000409604 DIO2Q92813 273 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 NAT6Q93015 286 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 TMEM19Q96HH6 336 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 TEX101Q9BY14 249 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 ZNF304Q9HCX3 659 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 NEUROD4Q9HD90 331 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 MRTO4Q9UKD2 239 aaKnown RBP10.79□□□□□ -0.68
SNX13-202ENST00000409604 VDAC3Q9Y277 283 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 MED16Q9Y2X0 877 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 ENTPD2Q9Y5L3 495 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 M0R3G1 203 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 M0R3H8 397 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 INMTO95050 263 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 GPX3P22352 226 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 BLVRAP53004 296 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 ITGA1P56199 1179 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 PLCXD2Q0VAA5 305 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 RFX4Q33E94 735 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 BCL7AQ4VC05 210 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 RNF111Q6ZNA4 994 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 SPATC1Q76KD6 591 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 AGBL5Q8NDL9 886 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 IFI44Q8TCB0 444 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 HCAR2Q8TDS4 363 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 THAP11Q96EK4 314 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 DNMT3AQ9Y6K1 912 aaPredicted RBP10.79□□□□□ -0.68
SNX13-202ENST00000409604 A0A0G2JMZ2 1700 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 ENO4A6NNW6 628 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 C11orf98E9PRG8 122 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 SEC14L5O43304 696 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 LINC00271P0C7V0 271 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 GLULP15104 373 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 BMP8BP34820 402 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 ZNF423Q2M1K9 1284 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 GPAT4Q86UL3 456 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 ZNF248Q8NDW4 579 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 OR4K17Q8NGC6 315 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 OR51Q1Q8NH59 317 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 TEX47Q8TBZ9 253 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 TMBIM1Q969X1 311 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 APOL4Q9BPW4 351 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 CMTM6Q9NX76 183 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 GPR45Q9Y5Y3 372 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 THSD7BQ9C0I4 1608 aa10.79□□□□□ -0.68
SNX13-202ENST00000409604 TRBV5-4A0A0C4DH59 114 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 OR5K3A6NET4 321 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 PLPP1O14494 284 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 HCN1O60741 890 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 IFNGR2P38484 337 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 SIGLEC14Q08ET2 396 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 OR52E8Q6IFG1 317 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 HSDL2Q6YN16 418 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 DCP2Q8IU60 420 aaKnown RBP10.78□□□□□ -0.68
SNX13-202ENST00000409604 LGI4Q8N135 537 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 OR6K6Q8NGW6 343 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 MS4A12Q9NXJ0 267 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 MAGED1Q9Y5V3 778 aaPredicted RBP10.78□□□□□ -0.68
SNX13-202ENST00000409604 PCM1Q15154 2024 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 NOTCH2Q04721 2471 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 ELOA3DA6NLF2 546 aaPredicted RBP10.78□□□□□ -0.68
SNX13-202ENST00000409604 GFYI3L273 518 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 CNOT3O75175 753 aaKnown RBP10.78□□□□□ -0.68
SNX13-202ENST00000409604 CSTAP01040 98 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 TCN2P20062 427 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 ACY1Q03154 408 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 GAS6Q14393 721 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 SYPL1Q16563 259 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 ELOA3BQ3SY89 546 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 CRB2Q5IJ48 1285 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 REEP3Q6NUK4 255 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 SYNPOQ8N3V7 929 aa10.78□□□□□ -0.68
SNX13-202ENST00000409604 ELOA3Q8NG57 546 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms